RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 PMM1Q92871 262 aa13.11□□□□□ -0.31
MSH5-208ENST00000429846 DDIT4LQ96D03 193 aa13.11□□□□□ -0.31
MSH5-208ENST00000429846 CCDC115Q96NT0 180 aa13.11□□□□□ -0.31
MSH5-208ENST00000429846 DHRS9Q9BPW9 319 aa13.11□□□□□ -0.31
MSH5-208ENST00000429846 AMBRA1Q9C0C7 1298 aa13.11□□□□□ -0.31
MSH5-208ENST00000429846 PARPBPQ9NWS1 579 aa13.11□□□□□ -0.31
MSH5-208ENST00000429846 BTNL2Q9UIR0 455 aa13.11□□□□□ -0.31
MSH5-208ENST00000429846 DCTN4Q9UJW0 460 aa13.11□□□□□ -0.31
MSH5-208ENST00000429846 B3GALT5Q9Y2C3 310 aa13.11□□□□□ -0.31
MSH5-208ENST00000429846 SLC9A8Q9Y2E8 581 aa13.11□□□□□ -0.31
MSH5-208ENST00000429846 AGAP5A6NIR3 686 aa13.1□□□□□ -0.31
MSH5-208ENST00000429846 HMGN4O00479 90 aa13.1□□□□□ -0.31
MSH5-208ENST00000429846 SSX4O60224 188 aa13.1□□□□□ -0.31
MSH5-208ENST00000429846 IFNA2P01563 188 aa13.1□□□□□ -0.31
MSH5-208ENST00000429846 CD40P25942 277 aa13.1□□□□□ -0.31
MSH5-208ENST00000429846 IDH2P48735 452 aaKnown RBP13.1□□□□□ -0.31
MSH5-208ENST00000429846 POLR2HP52434 150 aaKnown RBP13.1□□□□□ -0.31
MSH5-208ENST00000429846 SLC35A1P78382 337 aa13.1□□□□□ -0.31
MSH5-208ENST00000429846 TGFBR3Q03167 851 aa13.1□□□□□ -0.31
MSH5-208ENST00000429846 PLAURQ03405 335 aa13.1□□□□□ -0.31
MSH5-208ENST00000429846 GNA13Q14344 377 aa13.1□□□□□ -0.31
MSH5-208ENST00000429846 FAM174BQ3ZCQ3 159 aa13.1□□□□□ -0.31
MSH5-208ENST00000429846 ZNF544Q6NX49 715 aa13.1□□□□□ -0.31
MSH5-208ENST00000429846 WDR93Q6P2C0 686 aa13.1□□□□□ -0.31
MSH5-208ENST00000429846 PODNL1Q6PEZ8 512 aa13.1□□□□□ -0.31
MSH5-208ENST00000429846 CLEC2AQ6UVW9 174 aa13.1□□□□□ -0.31
MSH5-208ENST00000429846 HIPK1Q86Z02 1210 aa13.1□□□□□ -0.31
MSH5-208ENST00000429846 FBXL14Q8N1E6 418 aa13.1□□□□□ -0.31
MSH5-208ENST00000429846 MUC15Q8N387 334 aa13.1□□□□□ -0.31
MSH5-208ENST00000429846 C1orf162Q8NEQ5 155 aaPredicted RBP13.1□□□□□ -0.31
MSH5-208ENST00000429846 MUS81Q96NY9 551 aa13.1□□□□□ -0.31
MSH5-208ENST00000429846 TRNT1Q96Q11 434 aaKnown RBP13.1□□□□□ -0.31
MSH5-208ENST00000429846 SORT1Q99523 831 aa13.1□□□□□ -0.31
MSH5-208ENST00000429846 NAA11Q9BSU3 229 aaPredicted RBP13.1□□□□□ -0.31
MSH5-208ENST00000429846 CACNG6Q9BXT2 260 aa13.1□□□□□ -0.31
MSH5-208ENST00000429846 OR11A1Q9GZK7 315 aa13.1□□□□□ -0.31
MSH5-208ENST00000429846 MEAF6Q9HAF1 191 aa13.1□□□□□ -0.31
MSH5-208ENST00000429846 PRDM4Q9UKN5 801 aa13.1□□□□□ -0.31
MSH5-208ENST00000429846 HEATR1Q9H583 2144 aaKnown RBP13.1□□□□□ -0.31
MSH5-208ENST00000429846 WDR91A4D1P6 747 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 E7EQL1 145 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 H7C417 338 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 PDLIM1O00151 329 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 ITGA5P08648 1049 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 BMP4P12644 408 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 S100A3P33764 101 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 SLC1A6P48664 564 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 ZNF83P51522 516 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 OR2B6P58173 313 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 CHRNEQ04844 493 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 GABRA6Q16445 453 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 KRT71Q3SY84 523 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 PAQR6Q6TCH4 344 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 CASP12Q6UXS9 341 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 LRRC74BQ6ZQY2 392 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 CCDC103Q8IW40 242 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 MREGQ8N565 214 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 OR10H5Q8NGA6 315 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 WDR60Q8WVS4 1066 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 ZG16BQ96DA0 208 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 PANX1Q96RD7 426 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 INPP5KQ9BT40 448 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 NUF2Q9BZD4 464 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 C20orf27Q9GZN8 174 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 SLC38A1Q9H2H9 487 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 YAE1D1Q9NRH1 226 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 UPB1Q9UBR1 384 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 AMDHD2Q9Y303 409 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 FLVCR1Q9Y5Y0 555 aa13.09□□□□□ -0.31
MSH5-208ENST00000429846 TMED7-TICAM2A0A0A6YYA0 188 aa13.08□□□□□ -0.32
MSH5-208ENST00000429846 PRAMEF27A3QJZ7 478 aa13.08□□□□□ -0.32
MSH5-208ENST00000429846 CLDN24A6NM45 220 aa13.08□□□□□ -0.32
MSH5-208ENST00000429846 A8MV72 311 aaPredicted RBP13.08□□□□□ -0.32
MSH5-208ENST00000429846 RGS16O15492 202 aaPredicted RBP13.08□□□□□ -0.32
MSH5-208ENST00000429846 RPS4Y1P22090 263 aaKnown RBP13.08□□□□□ -0.32
MSH5-208ENST00000429846 NTF4P34130 210 aa13.08□□□□□ -0.32
MSH5-208ENST00000429846 SLC1A3P43003 542 aa13.08□□□□□ -0.32
MSH5-208ENST00000429846 IRX1P78414 480 aaPredicted RBP13.08□□□□□ -0.32
MSH5-208ENST00000429846 SPOCK1Q08629 439 aa13.08□□□□□ -0.32
MSH5-208ENST00000429846 SLC17A1Q14916 467 aa13.08□□□□□ -0.32
MSH5-208ENST00000429846 RAB35Q15286 201 aa13.08□□□□□ -0.32
MSH5-208ENST00000429846 RNF130Q86XS8 419 aa13.08□□□□□ -0.32
MSH5-208ENST00000429846 ZNF440Q8IYI8 595 aa13.08□□□□□ -0.32
MSH5-208ENST00000429846 CNOT9Q92600 299 aaKnown RBP13.08□□□□□ -0.32
MSH5-208ENST00000429846 TMEM45BQ96B21 275 aa13.08□□□□□ -0.32
MSH5-208ENST00000429846 PIF1Q9H611 641 aa13.08□□□□□ -0.32
MSH5-208ENST00000429846 FKRPQ9H9S5 495 aa13.08□□□□□ -0.32
MSH5-208ENST00000429846 OSGIN1Q9UJX0 560 aa13.08□□□□□ -0.32
MSH5-208ENST00000429846 TMED7Q9Y3B3 224 aa13.08□□□□□ -0.32
MSH5-208ENST00000429846 MXRA5Q9NR99 2828 aa13.08□□□□□ -0.32
MSH5-208ENST00000429846 STAB1Q9NY15 2570 aa13.07□□□□□ -0.32
MSH5-208ENST00000429846 IGHV4-30-2A0A087WSY4 118 aa13.07□□□□□ -0.32
MSH5-208ENST00000429846 A0A096LNT2 108 aa13.07□□□□□ -0.32
MSH5-208ENST00000429846 TMEM72A0PK05 275 aa13.07□□□□□ -0.32
MSH5-208ENST00000429846 CFAP73A6NFT4 308 aa13.07□□□□□ -0.32
MSH5-208ENST00000429846 ELOA3DA6NLF2 546 aaPredicted RBP13.07□□□□□ -0.32
MSH5-208ENST00000429846 M0R1B8 84 aa13.07□□□□□ -0.32
MSH5-208ENST00000429846 PGRP06401 933 aa13.07□□□□□ -0.32
MSH5-208ENST00000429846 DBIP07108 87 aaKnown RBP13.07□□□□□ -0.32
MSH5-208ENST00000429846 CHRM4P08173 479 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms