RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 ZMIZ1Q9ULJ6 1067 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 RNF6Q9Y252 685 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 GMPPBQ9Y5P6 360 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 ALPK2Q86TB3 2170 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 URB1O60287 2271 aaKnown RBP8.04□□□□□ -1.12
SMC6-204ENST00000428868 CEP295Q9C0D2 2601 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 ANKRD33BA6NCL7 494 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 EFCAB9A8MZ26 197 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 H3BN98 237 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 ETV2O00321 342 aaPredicted RBP8.03□□□□□ -1.12
SMC6-204ENST00000428868 SLC25A12O75746 678 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 SMNDC1O75940 238 aaKnown RBP eCLIP8.03□□□□□ -1.12
SMC6-204ENST00000428868 BGLAPP02818 100 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 OPN1LWP04000 364 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 P04436 131 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 CDH2P19022 906 aaPredicted RBP8.03□□□□□ -1.12
SMC6-204ENST00000428868 ENDOUP21128 410 aaKnown RBP8.03□□□□□ -1.12
SMC6-204ENST00000428868 CXCR1P25024 350 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 EIF2S3P41091 472 aaKnown RBP8.03□□□□□ -1.12
SMC6-204ENST00000428868 RPS5P46782 204 aaKnown RBP8.03□□□□□ -1.12
SMC6-204ENST00000428868 MASP1P48740 699 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 CD97P48960 835 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 RRADP55042 308 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 DLX5P56178 289 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 ISL1P61371 349 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 FOXO1Q12778 655 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 MFAP5Q13361 173 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 KEAP1Q14145 624 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 GINS1Q14691 196 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 SLC25A53Q5H9E4 307 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 CLEC12AQ5QGZ9 265 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 SLX4IPQ5VYV7 408 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 TTC23Q5W5X9 447 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 C12orf73Q69YU5 71 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 TMPRSS11FQ6ZWK6 438 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 RRM2BQ7LG56 351 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 GRINAQ7Z429 371 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 IGFN1Q86VF2 1251 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 CCDC103Q8IW40 242 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 SPACA3Q8IXA5 215 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 ENTHD1Q8IYW4 607 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 RNF113BQ8IZP6 322 aaKnown RBP8.03□□□□□ -1.12
SMC6-204ENST00000428868 ATP6V1C2Q8NEY4 427 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 FAM81AQ8TBF8 368 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 FANK1Q8TC84 345 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 ST8SIA1Q92185 356 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 GATA6Q92908 595 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 SGTBQ96EQ0 304 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 SGCZQ96LD1 299 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 HS6ST2Q96MM7 605 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 DCBLD2Q96PD2 775 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 TNFRSF13CQ96RJ3 184 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 RHNO1Q9BSD3 238 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 TMEM43Q9BTV4 400 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 OR52D1Q9H346 318 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 Q9H521 79 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 TMEM185BQ9H7F4 350 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 C12orf10Q9HB07 376 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 MCCC2Q9HCC0 563 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 SDHAF3Q9NRP4 125 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 SIGLEC7Q9Y286 467 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 RPH3AQ9Y2J0 694 aaPredicted RBP8.03□□□□□ -1.12
SMC6-204ENST00000428868 SSUH2Q9Y2M2 353 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 KCNMB2Q9Y691 235 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 CDH10Q9Y6N8 788 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 ANKRD11Q6UB99 2663 aaPredicted RBP8.03□□□□□ -1.12
SMC6-204ENST00000428868 PKD1L2Q7Z442 2459 aa8.03□□□□□ -1.12
SMC6-204ENST00000428868 ATMQ13315 3056 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 PTPRQQ9UMZ3 2332 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 GTF3C1Q12789 2109 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 MED12LQ86YW9 2145 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 OR5H15A6NDH6 313 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 C1QTNF9BB2RNN3 333 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 H3BML4 177 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 K7EM74 188 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 ZIC3O60481 467 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 NPIPB7O75200 414 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 PTP4A3O75365 173 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 WBP4O75554 376 aaKnown RBP8.02□□□□□ -1.13
SMC6-204ENST00000428868 OR7A10O76100 309 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 SLC2A10O95528 541 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 LYNP07948 512 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 C1QTNF9P0C862 333 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 SAGP10523 405 aaPredicted RBP8.02□□□□□ -1.13
SMC6-204ENST00000428868 PNMTP11086 282 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 IMPDH2P12268 514 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 PEPDP12955 493 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 GABRB1P18505 474 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 HK1P19367 917 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 KLK2P20151 261 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 GSTM3P21266 225 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 DPP4P27487 766 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 MSX1P28360 303 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 FMO3P31513 532 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 IFNGR2P38484 337 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 ZNF41P51814 821 aaPredicted RBP8.02□□□□□ -1.13
SMC6-204ENST00000428868 CHN2P52757 468 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 TPD52P55327 224 aaPredicted RBP8.02□□□□□ -1.13
SMC6-204ENST00000428868 B3GALT5-AS1P59052 145 aa8.02□□□□□ -1.13
SMC6-204ENST00000428868 ESRRGP62508 458 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms