RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 CALHM2Q9HA72 323 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 BRF2Q9HAW0 419 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 MGAT4AQ9UM21 535 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 MED16Q9Y2X0 877 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 PI4KAP42356 2102 aa9.87□□□□□ -0.83
TCOF1-204ENST00000427724 FIGNL2A6NMB9 653 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 M0R233 179 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 HSD17B7P56937 341 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 TNFRSF17Q02223 184 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 OR7A5Q15622 319 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 LTB4RQ15722 352 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 SYT6Q5T7P8 510 aaPredicted RBP9.86□□□□□ -0.83
TCOF1-204ENST00000427724 FRMPD2BQ6IN97 320 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 PWWP2BQ6NUJ5 590 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 METTL2BQ6P1Q9 378 aaKnown RBP9.86□□□□□ -0.83
TCOF1-204ENST00000427724 UNQ6126/PRO20091Q6UXV3 157 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 KIF18BQ86Y91 864 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 SFTPA2Q8IWL1 248 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 TNFRSF10DQ9UBN6 386 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 CKLFQ9UBR5 152 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 GPR52Q9Y2T5 361 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 FMO6PO60774 539 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 APOC3P02656 99 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 RLN1P04808 185 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 UBL4AP11441 157 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 EIF2S3P41091 472 aaKnown RBP9.86□□□□□ -0.83
TCOF1-204ENST00000427724 PPP1CAP62136 330 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 SLC14A1Q13336 389 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 GAS6Q14393 721 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 TRAM2Q15035 370 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 ELAVL1Q15717 326 aaKnown RBP9.86□□□□□ -0.83
TCOF1-204ENST00000427724 TBCEQ15813 527 aaPredicted RBP9.86□□□□□ -0.83
TCOF1-204ENST00000427724 TATDN3Q17R31 274 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 KDM4DQ6B0I6 523 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 XAF1Q6GPH4 301 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 DNAJC22Q8N4W6 341 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 GATAD2BQ8WXI9 593 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 NSMAFQ92636 917 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 SARAFQ96BY9 339 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 ADAD1Q96M93 576 aaKnown RBP9.86□□□□□ -0.83
TCOF1-204ENST00000427724 UBQLN4Q9NRR5 601 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 MBD2Q9UBB5 411 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 BTNL2Q9UIR0 455 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 NINQ8N4C6 2090 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 PCNX1Q96RV3 2341 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 ARPC4-TTLL3A0A0A6YYG9 625 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 ENTPD6O75354 484 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 MRPL33O75394 65 aaKnown RBP9.86□□□□□ -0.83
TCOF1-204ENST00000427724 NSA2O95478 260 aaKnown RBP9.86□□□□□ -0.83
TCOF1-204ENST00000427724 HMGN1P05114 100 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 GKN3PP0CG01 181 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 GSTM3P21266 225 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 PPIAP62937 165 aaKnown RBP9.86□□□□□ -0.83
TCOF1-204ENST00000427724 TIAL1Q01085 375 aaKnown RBP eCLIP9.86□□□□□ -0.83
TCOF1-204ENST00000427724 PON3Q15166 354 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 NDUFAF6Q330K2 333 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 TMPRSS7Q7RTY8 843 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 KRT77Q7Z794 578 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 ZNF440Q8IYI8 595 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 OR11G2Q8NGC1 345 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 MAP6Q96JE9 813 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 LCORQ96JN0 433 aaPredicted RBP9.86□□□□□ -0.83
TCOF1-204ENST00000427724 HYLS1Q96M11 299 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 NIPSNAP1Q9BPW8 284 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 MS4A8Q9BY19 250 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 LHX9Q9NQ69 397 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 TAS2R7Q9NYW3 318 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 NUP50Q9UKX7 468 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 MAB21L2Q9Y586 359 aa9.86□□□□□ -0.83
TCOF1-204ENST00000427724 A0A0G2JPF8 293 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 UBE2QL1A1L167 161 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 CLDN24A6NM45 220 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 HNRNPCL3B7ZW38 293 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 HCRTR1O43613 425 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 KHDRBS3O75525 346 aaKnown RBP9.85□□□□□ -0.83
TCOF1-204ENST00000427724 HNRNPCL4P0DMR1 293 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 RGS19P49795 217 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 P2RX3P56373 397 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 RASGEF1BQ0VAM2 473 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 BTN1A1Q13410 526 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 COX20Q5RI15 118 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 TMPRSS12Q86WS5 348 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 UEVLDQ8IX04 471 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 ZNF687Q8N1G0 1237 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 OR4K5Q8NGD3 323 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 OR51G2Q8NGK0 314 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 COQ8AQ8NI60 647 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 DYNC2LI1Q8TCX1 351 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 EDARQ9UNE0 448 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 METTL15A6NJ78 407 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 RAB36O95755 333 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 CD2P06729 351 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 DNASE1P24855 282 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 REEP5Q00765 189 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 SLC3A1Q07837 685 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 CTF1Q16619 201 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 LACC1Q8IV20 430 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 ZNF683Q8IZ20 524 aa9.85□□□□□ -0.83
TCOF1-204ENST00000427724 ZSCAN4Q8NAM6 433 aaPredicted RBP9.85□□□□□ -0.83
TCOF1-204ENST00000427724 FBXO8Q9NRD0 319 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms