RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 KDM8Q8N371 416 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 GIPC3Q8TF64 312 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 TM9SF4Q92544 642 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 DHRS1Q96LJ7 313 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 SFXN2Q96NB2 322 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 GTF3C1Q12789 2109 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 TRAV27A0A087WT01 109 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 FMO6PO60774 539 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 GLSO94925 669 aaPredicted RBP12.13□□□□□ -0.47
PRPF39-202ENST00000424478 RASAL1O95294 804 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 B3GALT5-AS1P59052 145 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 LTBQ06643 244 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 TMEM176BQ3YBM2 270 aaPredicted RBP12.13□□□□□ -0.47
PRPF39-202ENST00000424478 GLYR1Q49A26 553 aaPredicted RBP12.13□□□□□ -0.47
PRPF39-202ENST00000424478 PGBD2Q6P3X8 592 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 TRILQ7L0X0 811 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 RRM2BQ7LG56 351 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 OR5K1Q8NHB7 308 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 TAAR8Q969N4 342 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 EXO5Q9H790 373 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 IGHV3-15A0A0B4J1V0 119 aa12.12□□□□□ -0.47
PRPF39-202ENST00000424478 SERPINI2O75830 405 aa12.12□□□□□ -0.47
PRPF39-202ENST00000424478 ENDOUP21128 410 aaKnown RBP12.12□□□□□ -0.47
PRPF39-202ENST00000424478 MSX1P28360 303 aa12.12□□□□□ -0.47
PRPF39-202ENST00000424478 POLR2HP52434 150 aaKnown RBP12.12□□□□□ -0.47
PRPF39-202ENST00000424478 AQP4P55087 323 aa12.12□□□□□ -0.47
PRPF39-202ENST00000424478 SHQ1Q6PI26 577 aaKnown RBP12.12□□□□□ -0.47
PRPF39-202ENST00000424478 IGFN1Q86VF2 1251 aa12.12□□□□□ -0.47
PRPF39-202ENST00000424478 OR13C2Q8NGS9 318 aa12.12□□□□□ -0.47
PRPF39-202ENST00000424478 OR51A7Q8NH64 312 aa12.12□□□□□ -0.47
PRPF39-202ENST00000424478 ACOT11Q8WXI4 607 aaPredicted RBP12.12□□□□□ -0.47
PRPF39-202ENST00000424478 OR5B2Q96R09 309 aa12.12□□□□□ -0.47
PRPF39-202ENST00000424478 EPYCQ99645 322 aa12.12□□□□□ -0.47
PRPF39-202ENST00000424478 ENKD1Q9H0I2 346 aa12.12□□□□□ -0.47
PRPF39-202ENST00000424478 KIF17Q9P2E2 1029 aa12.12□□□□□ -0.47
PRPF39-202ENST00000424478 CHRNA9Q9UGM1 479 aa12.12□□□□□ -0.47
PRPF39-202ENST00000424478 SNAP29O95721 258 aa12.12□□□□□ -0.47
PRPF39-202ENST00000424478 CLIC3O95833 236 aa12.12□□□□□ -0.47
PRPF39-202ENST00000424478 CMPK2Q5EBM0 449 aa12.12□□□□□ -0.47
PRPF39-202ENST00000424478 ZNF770Q6IQ21 691 aaPredicted RBP12.12□□□□□ -0.47
PRPF39-202ENST00000424478 TTC33Q6PID6 262 aaPredicted RBP12.12□□□□□ -0.47
PRPF39-202ENST00000424478 DNAJA4Q8WW22 397 aaPredicted RBP12.12□□□□□ -0.47
PRPF39-202ENST00000424478 TMEM234Q8WY98 164 aa12.12□□□□□ -0.47
PRPF39-202ENST00000424478 EGLN3Q9H6Z9 239 aa12.12□□□□□ -0.47
PRPF39-202ENST00000424478 KIAA1549Q9HCM3 1950 aa12.12□□□□□ -0.47
PRPF39-202ENST00000424478 C7orf72A4D263 438 aa12.12□□□□□ -0.47
PRPF39-202ENST00000424478 TMEM8BA6NDV4 472 aa12.12□□□□□ -0.47
PRPF39-202ENST00000424478 M0R129 80 aa12.12□□□□□ -0.47
PRPF39-202ENST00000424478 SAGP10523 405 aaPredicted RBP12.12□□□□□ -0.47
PRPF39-202ENST00000424478 POU1F1P28069 291 aa12.12□□□□□ -0.47
PRPF39-202ENST00000424478 SRD5A2P31213 254 aa12.12□□□□□ -0.47
PRPF39-202ENST00000424478 IFNA8P32881 189 aa12.12□□□□□ -0.47
PRPF39-202ENST00000424478 SUCLG1P53597 346 aaKnown RBP12.12□□□□□ -0.47
PRPF39-202ENST00000424478 LINC00114Q6XXX2 140 aa12.12□□□□□ -0.47
PRPF39-202ENST00000424478 LDAHQ9H6V9 325 aa12.12□□□□□ -0.47
PRPF39-202ENST00000424478 TMEFF2Q9UIK5 374 aaPredicted RBP12.12□□□□□ -0.47
PRPF39-202ENST00000424478 FAM47E-STBD1D6RA91 191 aa12.11□□□□□ -0.47
PRPF39-202ENST00000424478 TNFSF11O14788 317 aa12.11□□□□□ -0.47
PRPF39-202ENST00000424478 ZNF26P17031 533 aaPredicted RBP12.11□□□□□ -0.47
PRPF39-202ENST00000424478 HMGA2P52926 109 aa12.11□□□□□ -0.47
PRPF39-202ENST00000424478 OGFRL1Q5TC84 451 aaPredicted RBP12.11□□□□□ -0.47
PRPF39-202ENST00000424478 TMEM236Q5W0B7 351 aa12.11□□□□□ -0.47
PRPF39-202ENST00000424478 ST8SIA1Q92185 356 aa12.11□□□□□ -0.47
PRPF39-202ENST00000424478 BPIFA2Q96DR5 249 aa12.11□□□□□ -0.47
PRPF39-202ENST00000424478 ALKBH4Q9NXW9 302 aa12.11□□□□□ -0.47
PRPF39-202ENST00000424478 MED31Q9Y3C7 131 aa12.11□□□□□ -0.47
PRPF39-202ENST00000424478 OMPP47874 163 aa12.11□□□□□ -0.47
PRPF39-202ENST00000424478 SUMO3P55854 103 aaPredicted RBP12.11□□□□□ -0.47
PRPF39-202ENST00000424478 OR7A5Q15622 319 aa12.11□□□□□ -0.47
PRPF39-202ENST00000424478 ZSWIM7Q19AV6 140 aa12.11□□□□□ -0.47
PRPF39-202ENST00000424478 CLEC12AQ5QGZ9 265 aa12.11□□□□□ -0.47
PRPF39-202ENST00000424478 IZUMO2Q6UXV1 221 aa12.11□□□□□ -0.47
PRPF39-202ENST00000424478 MBOAT2Q6ZWT7 520 aa12.11□□□□□ -0.47
PRPF39-202ENST00000424478 OIT3Q8WWZ8 545 aa12.11□□□□□ -0.47
PRPF39-202ENST00000424478 SPRR3Q9UBC9 169 aa12.11□□□□□ -0.47
PRPF39-202ENST00000424478 B4GALT7Q9UBV7 327 aa12.11□□□□□ -0.47
PRPF39-202ENST00000424478 PCNX1Q96RV3 2341 aa12.11□□□□□ -0.47
PRPF39-202ENST00000424478 KDM4EB2RXH2 506 aaPredicted RBP12.1□□□□□ -0.47
PRPF39-202ENST00000424478 MLLT10P55197 1068 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 CLDN15P56746 228 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 SYT14P1Q58G82 188 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 SLC22A16Q86VW1 577 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 IQCF1Q8N6M8 205 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 TEX19Q8NA77 164 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 ZNF845Q96IR2 970 aaPredicted RBP12.1□□□□□ -0.47
PRPF39-202ENST00000424478 MRGPRX4Q96LA9 322 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 ZNF426Q9BUY5 554 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 PLA2G12AQ9BZM1 189 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 AASSQ9UDR5 926 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 ZNF814B7Z6K7 855 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 FAAHO00519 579 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 DLGAP1O14490 977 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 EIF1AYO14602 144 aaKnown RBP12.1□□□□□ -0.47
PRPF39-202ENST00000424478 RAMP1O60894 148 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 IMPDH2P12268 514 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 ARHGDIAP52565 204 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 PPP2R2BQ00005 443 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 MYBPHQ13203 477 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 SLC10A1Q14973 349 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 GTPBP8Q8N3Z3 284 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms