RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 FAM181BA6NEQ2 426 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 A6NNC1 897 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 YJEFN3A6XGL0 299 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 H3BN98 237 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 H7BY64 318 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 KCNK1O00180 336 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 NRG2O14511 850 aaPredicted RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 AQP8O94778 261 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 VAPBO95292 243 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 FAM153BP0C7A2 387 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 FAM157CP0CG43 387 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 HSMCR30P0CW71 290 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 MATN1P21941 496 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 COL8A1P27658 744 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 IDH3GP51553 393 aaPredicted RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 GNG11P61952 73 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 NKX3-2P78367 333 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 ID2Q02363 134 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 HSPB3Q12988 150 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 NPTX1Q15818 432 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 TMEM176BQ3YBM2 270 aaPredicted RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 KCTD21Q4G0X4 260 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 KCTD16Q68DU8 428 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 ZNF704Q6ZNC4 412 aaPredicted RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 Q6ZPB1 254 aaPredicted RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 SLITRK4Q8IW52 837 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 SLC30A8Q8IWU4 369 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 LRRC25Q8N386 305 aaPredicted RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 B3GNT7Q8NFL0 401 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 FDCSPQ8NFU4 85 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 WBP2Q969T9 261 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 C8orf44Q96CB5 159 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 VWCEQ96DN2 955 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 SLC35A4Q96G79 324 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 PDXPQ96GD0 296 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 C7orf26Q96N11 449 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 PRAP1Q96NZ9 151 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 WDFY2Q96P53 400 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 OR2A14Q96R47 310 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 POFUT1Q9H488 388 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 ZNF696Q9H7X3 374 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 ING3Q9NXR8 418 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 COMMD9Q9P000 198 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 TINAGQ9UJW2 476 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 IKZF2Q9UKS7 526 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 SOX13Q9UN79 622 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 CNTN6Q9UQ52 1028 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 PPIL1Q9Y3C6 166 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 USP9YO00507 2555 aaPredicted RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 EXOC1LA0A1B0GW35 172 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 HMX2A2RU54 273 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 CCDC154A6NI56 674 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 SAGE2PA6NJ88 616 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 KPNA4O00629 521 aaPredicted RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 FBXO24O75426 580 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 RPSAP08865 295 aaKnown RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 KITP10721 976 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 PNMTP11086 282 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 TFEBP19484 476 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 ERVK-16P61578 105 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 TNFAIP6P98066 277 aaPredicted RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 GALNT2Q10471 571 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 CPTPQ5TA50 214 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 LRRC38Q5VT99 294 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 NAIF1Q69YI7 327 aaPredicted RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 PLBD1Q6P4A8 553 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 ZNF621Q6ZSS3 439 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 TRILQ7L0X0 811 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 PLCZ1Q86YW0 608 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 SLC15A3Q8IY34 581 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 PGBD5Q8N414 524 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 PACRGLQ8N7B6 248 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 AURKBQ96GD4 344 aaPredicted RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 NSUN5Q96P11 429 aaKnown RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 PITHD1Q9GZP4 211 aaPredicted RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 AKTIPQ9H8T0 292 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 PELI2Q9HAT8 420 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 FKBP14Q9NWM8 211 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 FOXJ2Q9P0K8 574 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 TAAR3PQ9P1P4 343 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 MIOXQ9UGB7 285 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 GRID1Q9ULK0 1009 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 RAB26Q9ULW5 256 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 A4GNTQ9UNA3 340 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 MRPS18BQ9Y676 258 aaKnown RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 CPAMD8Q8IZJ3 1885 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 FANCMQ8IYD8 2048 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 FREM1Q5H8C1 2179 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 ZNF106Q9H2Y7 1883 aaKnown RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 TRAV38-1A0A0B4J264 116 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 A0A0J9YYE9 177 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 A0A1W2PRB8 838 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 HTR3EA5X5Y0 456 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 TRPC5OSA6NMA1 111 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 OR2T1O43869 369 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 KHDRBS3O75525 346 aaKnown RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 UBL3O95164 117 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 TRBC1P01850 177 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 LCATP04180 440 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 SERPINE1P05121 402 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms