RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 DSPPQ9NZW4 1301 aa22.56■■□□□ 1.2
SMDT1-202ENST00000422252 GPR171O14626 319 aa22.55■■□□□ 1.2
SMDT1-202ENST00000422252 BCHEP06276 602 aa22.55■■□□□ 1.2
SMDT1-202ENST00000422252 PAX1P15863 534 aa22.55■■□□□ 1.2
SMDT1-202ENST00000422252 MAP2K6P52564 334 aa22.55■■□□□ 1.2
SMDT1-202ENST00000422252 SLC16A1P53985 500 aa22.55■■□□□ 1.2
SMDT1-202ENST00000422252 CRISP3P54108 245 aa22.55■■□□□ 1.2
SMDT1-202ENST00000422252 STK11Q15831 433 aa22.55■■□□□ 1.2
SMDT1-202ENST00000422252 LIN52Q52LA3 116 aa22.55■■□□□ 1.2
SMDT1-202ENST00000422252 C6orf10Q5SRN2 563 aa22.55■■□□□ 1.2
SMDT1-202ENST00000422252 SEZ6L2Q6UXD5 910 aa22.55■■□□□ 1.2
SMDT1-202ENST00000422252 ZNF836Q6ZNA1 936 aa22.55■■□□□ 1.2
SMDT1-202ENST00000422252 AURKBQ96GD4 344 aaPredicted RBP22.55■■□□□ 1.2
SMDT1-202ENST00000422252 C7orf26Q96N11 449 aa22.55■■□□□ 1.2
SMDT1-202ENST00000422252 RLIMQ9NVW2 624 aa22.55■■□□□ 1.2
SMDT1-202ENST00000422252 THUMPD1Q9NXG2 353 aaKnown RBP22.55■■□□□ 1.2
SMDT1-202ENST00000422252 FAM234BA2RU67 622 aa22.54■■□□□ 1.2
SMDT1-202ENST00000422252 CDHR4A6H8M9 788 aa22.54■■□□□ 1.2
SMDT1-202ENST00000422252 CLOCKO15516 846 aa22.54■■□□□ 1.2
SMDT1-202ENST00000422252 TFPTP0C1Z6 253 aa22.54■■□□□ 1.2
SMDT1-202ENST00000422252 SLC35A1P78382 337 aa22.54■■□□□ 1.2
SMDT1-202ENST00000422252 H3F3AP84243 136 aa22.54■■□□□ 1.2
SMDT1-202ENST00000422252 PPA1Q15181 289 aa22.54■■□□□ 1.2
SMDT1-202ENST00000422252 KRTAP21-3Q3LHN1 58 aa22.54■■□□□ 1.2
SMDT1-202ENST00000422252 FBXW9Q5XUX1 488 aa22.54■■□□□ 1.2
SMDT1-202ENST00000422252 VRK2Q86Y07 508 aa22.54■■□□□ 1.2
SMDT1-202ENST00000422252 CCDC103Q8IW40 242 aa22.54■■□□□ 1.2
SMDT1-202ENST00000422252 UBE2J2Q8N2K1 259 aa22.54■■□□□ 1.2
SMDT1-202ENST00000422252 LILRB1Q8NHL6 650 aaPredicted RBP22.54■■□□□ 1.2
SMDT1-202ENST00000422252 SLC38A5Q8WUX1 472 aa22.54■■□□□ 1.2
SMDT1-202ENST00000422252 APH1AQ96BI3 265 aa22.54■■□□□ 1.2
SMDT1-202ENST00000422252 ADAM19Q9H013 955 aa22.54■■□□□ 1.2
SMDT1-202ENST00000422252 EIF1BO60739 113 aaKnown RBP22.53■■□□□ 1.2
SMDT1-202ENST00000422252 RAMP1O60894 148 aa22.53■■□□□ 1.2
SMDT1-202ENST00000422252 GKN3PP0CG01 181 aa22.53■■□□□ 1.2
SMDT1-202ENST00000422252 IMPDH2P12268 514 aa22.53■■□□□ 1.2
SMDT1-202ENST00000422252 HOXB4P17483 251 aaPredicted RBP22.53■■□□□ 1.2
SMDT1-202ENST00000422252 GGT1P19440 569 aa22.53■■□□□ 1.2
SMDT1-202ENST00000422252 TIMM23BQ5SRD1 257 aa22.53■■□□□ 1.2
SMDT1-202ENST00000422252 SSX8Q7RTT4 187 aa22.53■■□□□ 1.2
SMDT1-202ENST00000422252 ATG4DQ86TL0 474 aaPredicted RBP22.53■■□□□ 1.2
SMDT1-202ENST00000422252 ZNF433Q8N7K0 673 aaPredicted RBP22.53■■□□□ 1.2
SMDT1-202ENST00000422252 MUCL1Q96DR8 90 aa22.53■■□□□ 1.2
SMDT1-202ENST00000422252 COX4I2Q96KJ9 171 aa22.53■■□□□ 1.2
SMDT1-202ENST00000422252 BDH2Q9BUT1 245 aa22.53■■□□□ 1.2
SMDT1-202ENST00000422252 ZNF701Q9NV72 531 aaPredicted RBP22.53■■□□□ 1.2
SMDT1-202ENST00000422252 PRDM4Q9UKN5 801 aa22.53■■□□□ 1.2
SMDT1-202ENST00000422252 TMEM247A6NEH6 219 aa22.52■■□□□ 1.2
SMDT1-202ENST00000422252 PGM3O95394 542 aa22.52■■□□□ 1.2
SMDT1-202ENST00000422252 IGHV3-9P01782 118 aa22.52■■□□□ 1.2
SMDT1-202ENST00000422252 BSPH1Q075Z2 132 aa22.52■■□□□ 1.2
SMDT1-202ENST00000422252 RNF220Q5VTB9 566 aa22.52■■□□□ 1.2
SMDT1-202ENST00000422252 P2RY8Q86VZ1 359 aa22.52■■□□□ 1.2
SMDT1-202ENST00000422252 LSRQ86X29 649 aaPredicted RBP22.52■■□□□ 1.2
SMDT1-202ENST00000422252 GTF2H4Q92759 462 aa22.52■■□□□ 1.2
SMDT1-202ENST00000422252 FBXW5Q969U6 566 aa22.52■■□□□ 1.2
SMDT1-202ENST00000422252 TMEM19Q96HH6 336 aa22.52■■□□□ 1.2
SMDT1-202ENST00000422252 NAA11Q9BSU3 229 aaPredicted RBP22.52■■□□□ 1.2
SMDT1-202ENST00000422252 TCF7L2Q9NQB0 619 aa22.52■■□□□ 1.2
SMDT1-202ENST00000422252 LAMP3Q9UQV4 416 aa22.52■■□□□ 1.2
SMDT1-202ENST00000422252 ZNF443Q9Y2A4 671 aaPredicted RBP22.52■■□□□ 1.2
SMDT1-202ENST00000422252 PCDHB14Q9Y5E9 798 aa22.52■■□□□ 1.2
SMDT1-202ENST00000422252 NIPBLQ6KC79 2804 aaeCLIP22.52■■□□□ 1.2
SMDT1-202ENST00000422252 A0A0G2JPF8 293 aa22.51■■□□□ 1.19
SMDT1-202ENST00000422252 ZC3H12DA2A288 527 aaKnown RBP22.51■■□□□ 1.19
SMDT1-202ENST00000422252 DPRXA6NFQ7 191 aa22.51■■□□□ 1.19
SMDT1-202ENST00000422252 FAM171A2A8MVW0 826 aa22.51■■□□□ 1.19
SMDT1-202ENST00000422252 HNRNPCL2B2RXH8 293 aa22.51■■□□□ 1.19
SMDT1-202ENST00000422252 HNRNPCL3B7ZW38 293 aa22.51■■□□□ 1.19
SMDT1-202ENST00000422252 H7C1Q1 480 aa22.51■■□□□ 1.19
SMDT1-202ENST00000422252 POLR3GO15318 223 aaPredicted RBP22.51■■□□□ 1.19
SMDT1-202ENST00000422252 HNRNPCL1O60812 293 aaKnown RBP22.51■■□□□ 1.19
SMDT1-202ENST00000422252 MRPL33O75394 65 aaKnown RBP22.51■■□□□ 1.19
SMDT1-202ENST00000422252 TGDSO95455 350 aa22.51■■□□□ 1.19
SMDT1-202ENST00000422252 HNRNPCL4P0DMR1 293 aa22.51■■□□□ 1.19
SMDT1-202ENST00000422252 CXCR1P25024 350 aa22.51■■□□□ 1.19
SMDT1-202ENST00000422252 NTF4P34130 210 aa22.51■■□□□ 1.19
SMDT1-202ENST00000422252 ACAA2P42765 397 aaKnown RBP22.51■■□□□ 1.19
SMDT1-202ENST00000422252 MRPL19P49406 292 aaKnown RBP22.51■■□□□ 1.19
SMDT1-202ENST00000422252 STX1BP61266 288 aa22.51■■□□□ 1.19
SMDT1-202ENST00000422252 LARS2Q15031 903 aaKnown RBP22.51■■□□□ 1.19
SMDT1-202ENST00000422252 ZSWIM7Q19AV6 140 aa22.51■■□□□ 1.19
SMDT1-202ENST00000422252 RPS26P11Q5JNZ5 115 aaPredicted RBP22.51■■□□□ 1.19
SMDT1-202ENST00000422252 SLC2A7Q6PXP3 512 aa22.51■■□□□ 1.19
SMDT1-202ENST00000422252 CLEC9AQ6UXN8 241 aa22.51■■□□□ 1.19
SMDT1-202ENST00000422252 CIARTQ8N365 385 aaPredicted RBP22.51■■□□□ 1.19
SMDT1-202ENST00000422252 LRRC8CQ8TDW0 803 aa22.51■■□□□ 1.19
SMDT1-202ENST00000422252 PAIP1Q9H074 479 aaKnown RBP22.51■■□□□ 1.19
SMDT1-202ENST00000422252 CACYBPQ9HB71 228 aaKnown RBP22.51■■□□□ 1.19
SMDT1-202ENST00000422252 OR5H1A6NKK0 313 aa22.5■■□□□ 1.19
SMDT1-202ENST00000422252 THBS1P07996 1170 aa22.5■■□□□ 1.19
SMDT1-202ENST00000422252 COPZ1P61923 177 aa22.5■■□□□ 1.19
SMDT1-202ENST00000422252 RPS4XP62701 263 aaKnown RBP22.5■■□□□ 1.19
SMDT1-202ENST00000422252 RGNQ15493 299 aa22.5■■□□□ 1.19
SMDT1-202ENST00000422252 ZNF672Q499Z4 452 aaPredicted RBP22.5■■□□□ 1.19
SMDT1-202ENST00000422252 WBP2NLQ6ICG8 309 aa22.5■■□□□ 1.19
SMDT1-202ENST00000422252 Q71RC1 249 aaPredicted RBP22.5■■□□□ 1.19
SMDT1-202ENST00000422252 KBTBD8Q8NFY9 601 aa22.5■■□□□ 1.19
SMDT1-202ENST00000422252 NEUROG1Q92886 237 aa22.5■■□□□ 1.19
SMDT1-202ENST00000422252 ATP6V1G3Q96LB4 118 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms