RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 EPHA2P29317 976 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 EIF1P41567 113 aaKnown RBP5.42□□□□□ -1.54
HMGB3-202ENST00000419110 CYB561P49447 251 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 PCYT1AP49585 367 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 GSK3AP49840 483 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 HLCSP50747 726 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 GAS1P54826 345 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 CXCR4P61073 352 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 TUBA4AP68366 448 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 CDC20Q12834 499 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 MFSD13AQ14CX5 517 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 PTGES3Q15185 160 aaKnown RBP5.42□□□□□ -1.54
HMGB3-202ENST00000419110 CTU2Q2VPK5 515 aaKnown RBP5.42□□□□□ -1.54
HMGB3-202ENST00000419110 PLPPR5Q32ZL2 321 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 ANKDD1AQ495B1 522 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 RNFT1Q5M7Z0 435 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 CLEC12AQ5QGZ9 265 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 ACER2Q5QJU3 275 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 SLC22A10Q63ZE4 541 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 BICRALQ6AI39 1079 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 POMZP3Q6PJE2 187 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 ZNF773Q6PK81 442 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 SMARCD3Q6STE5 483 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 Q6ZPB1 254 aaPredicted RBP5.42□□□□□ -1.54
HMGB3-202ENST00000419110 PTCHD4Q6ZW05 846 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 TMPRSS11FQ6ZWK6 438 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 OAFQ86UD1 273 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 MEX3DQ86XN8 651 aaKnown RBP5.42□□□□□ -1.54
HMGB3-202ENST00000419110 KIF18BQ86Y91 864 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 MARCH9Q86YJ5 346 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 PLCZ1Q86YW0 608 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 GID4Q8IVV7 300 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 ENTHD1Q8IYW4 607 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 BEST3Q8N1M1 668 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 SVOPQ8N4V2 548 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 PSD4Q8NDX1 1056 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 TSPAN14Q8NG11 270 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 OR8D4Q8NGM9 314 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 OR8J1Q8NGP2 316 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 CNIH3Q8TBE1 160 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 STK35Q8TDR2 534 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 PAQR8Q8TEZ7 354 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 FBLIM1Q8WUP2 373 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 KCNE4Q8WWG9 221 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 IPCEF1Q8WWN9 437 aaPredicted RBP5.42□□□□□ -1.54
HMGB3-202ENST00000419110 ZBTB8AQ96BR9 441 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 DDIT4LQ96D03 193 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 C1GALT1C1Q96EU7 318 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 TMEM41AQ96HV5 264 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 MRGPRX4Q96LA9 322 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 C5orf34Q96MH7 638 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 UTP23Q9BRU9 249 aaKnown RBP5.42□□□□□ -1.54
HMGB3-202ENST00000419110 IFT27Q9BW83 186 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 TSSK6Q9BXA6 273 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 POLDIP3Q9BY77 421 aaKnown RBP5.42□□□□□ -1.54
HMGB3-202ENST00000419110 PLA2G12AQ9BZM1 189 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 EGLN3Q9H6Z9 239 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 FKRPQ9H9S5 495 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 RASSF1Q9NS23 344 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 C20orf141Q9NUB4 165 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 MED17Q9NVC6 651 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 CLN6Q9NWW5 311 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 TUBA8Q9NY65 449 aaPredicted RBP5.42□□□□□ -1.54
HMGB3-202ENST00000419110 DLL3Q9NYJ7 618 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 GPR83Q9NYM4 423 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 REV1Q9UBZ9 1251 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 CHRNA9Q9UGM1 479 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 ZNF229Q9UJW7 825 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 BOKQ9UMX3 212 aaPredicted RBP5.42□□□□□ -1.54
HMGB3-202ENST00000419110 VDAC3Q9Y277 283 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 SLC6A5Q9Y345 797 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 TMED7Q9Y3B3 224 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 ZNF337Q9Y3M9 751 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 CHCHD2Q9Y6H1 151 aaPredicted RBP5.42□□□□□ -1.54
HMGB3-202ENST00000419110 PTPRZ1P23471 2315 aaPredicted RBP5.41□□□□□ -1.54
HMGB3-202ENST00000419110 CNTRLQ7Z7A1 2325 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 IGKV1D-42A0A075B6H8 117 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 SH3D21A4FU49 640 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 ANKRD33BA6NCL7 494 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 ARGFXA6NJG6 315 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 C17orf51A8MQB3 221 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 A8MVM7 634 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 E9PQ18 207 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 M0R129 80 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 CDC42EP2O14613 210 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 ADAM10O14672 748 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 RGS10O43665 173 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 MRPS14O60783 128 aaKnown RBP5.41□□□□□ -1.54
HMGB3-202ENST00000419110 NOL3O60936 208 aaKnown RBP5.41□□□□□ -1.54
HMGB3-202ENST00000419110 LILRA1O75019 489 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 SMNDC1O75940 238 aaKnown RBP eCLIP5.41□□□□□ -1.54
HMGB3-202ENST00000419110 SNX4O95219 450 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 NTN1O95631 604 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 CH25HO95992 272 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 CLPTM1O96005 669 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 HIST1H2ABP04908 130 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 CCNA2P20248 432 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 MAKP20794 623 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 CRHBPP24387 322 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms