RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 NXPE2Q96DL1 559 aa18.86■□□□□ 0.61
CASC3-203ENST00000418132 SAMD8Q96LT4 415 aa18.86■□□□□ 0.61
CASC3-203ENST00000418132 MPDZO75970 2070 aa18.86■□□□□ 0.61
CASC3-203ENST00000418132 TMED7-TICAM2A0A0A6YYA0 188 aa18.86■□□□□ 0.61
CASC3-203ENST00000418132 HCN1O60741 890 aa18.86■□□□□ 0.61
CASC3-203ENST00000418132 ITGA3P26006 1051 aa18.86■□□□□ 0.61
CASC3-203ENST00000418132 SH3BGRP55822 239 aaPredicted RBP18.86■□□□□ 0.61
CASC3-203ENST00000418132 GABARAPL2P60520 117 aa18.86■□□□□ 0.61
CASC3-203ENST00000418132 SNRPGP62308 76 aaKnown RBP18.86■□□□□ 0.61
CASC3-203ENST00000418132 EFNB1P98172 346 aa18.86■□□□□ 0.61
CASC3-203ENST00000418132 SMN1Q16637 294 aaKnown RBP18.86■□□□□ 0.61
CASC3-203ENST00000418132 ARSKQ6UWY0 536 aa18.86■□□□□ 0.61
CASC3-203ENST00000418132 OR8J1Q8NGP2 316 aa18.86■□□□□ 0.61
CASC3-203ENST00000418132 LIPHQ8WWY8 451 aa18.86■□□□□ 0.61
CASC3-203ENST00000418132 ISOC1Q96CN7 298 aa18.86■□□□□ 0.61
CASC3-203ENST00000418132 POLDIP3Q9BY77 421 aaKnown RBP18.86■□□□□ 0.61
CASC3-203ENST00000418132 MED17Q9NVC6 651 aa18.86■□□□□ 0.61
CASC3-203ENST00000418132 STMN3Q9NZ72 180 aa18.86■□□□□ 0.61
CASC3-203ENST00000418132 TMED7Q9Y3B3 224 aa18.86■□□□□ 0.61
CASC3-203ENST00000418132 TRMUO75648 421 aaKnown RBP18.85■□□□□ 0.61
CASC3-203ENST00000418132 OR7A10O76100 309 aa18.85■□□□□ 0.61
CASC3-203ENST00000418132 SDHBP21912 280 aa18.85■□□□□ 0.61
CASC3-203ENST00000418132 TTKP33981 857 aa18.85■□□□□ 0.61
CASC3-203ENST00000418132 SLC9A3P48764 834 aa18.85■□□□□ 0.61
CASC3-203ENST00000418132 PIGFQ07326 219 aa18.85■□□□□ 0.61
CASC3-203ENST00000418132 SLC25A53Q5H9E4 307 aa18.85■□□□□ 0.61
CASC3-203ENST00000418132 CLEC12AQ5QGZ9 265 aa18.85■□□□□ 0.61
CASC3-203ENST00000418132 ATP1A1-AS1Q5TC04 95 aa18.85■□□□□ 0.61
CASC3-203ENST00000418132 SMARCD3Q6STE5 483 aa18.85■□□□□ 0.61
CASC3-203ENST00000418132 MDGA2Q7Z553 956 aa18.85■□□□□ 0.61
CASC3-203ENST00000418132 SPARTQ8N0X7 666 aa18.85■□□□□ 0.61
CASC3-203ENST00000418132 OR4Q3Q8NH05 313 aa18.85■□□□□ 0.61
CASC3-203ENST00000418132 THAP4Q8WY91 577 aa18.85■□□□□ 0.61
CASC3-203ENST00000418132 TVP23BQ9NYZ1 205 aa18.85■□□□□ 0.61
CASC3-203ENST00000418132 CPAMD8Q8IZJ3 1885 aa18.85■□□□□ 0.61
CASC3-203ENST00000418132 FREM2Q5SZK8 3169 aa18.85■□□□□ 0.61
CASC3-203ENST00000418132 TRAV27A0A087WT01 109 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 XPNPEP2O43895 674 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 NPIPB7O75200 414 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 CH25HO95992 272 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 HTR1AP08908 422 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 JUNBP17275 347 aaPredicted RBP18.84■□□□□ 0.61
CASC3-203ENST00000418132 BMP7P18075 431 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 CYB561P49447 251 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 PCYT1AP49585 367 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 CSNK2BP67870 215 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 SRSF6Q13247 344 aaKnown RBP18.84■□□□□ 0.61
CASC3-203ENST00000418132 ZNF74Q16587 644 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 TBC1D25Q3MII6 688 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 XAF1Q6GPH4 301 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 ZNF227Q86WZ6 799 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 PLCZ1Q86YW0 608 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 SLC43A2Q8N370 569 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 OR2T33Q8NG76 320 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 OR51A7Q8NH64 312 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 TNFRSF13CQ96RJ3 184 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 TUBA1CQ9BQE3 449 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 ENKD1Q9H0I2 346 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 UBQLN3Q9H347 655 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 PLCXD1Q9NUJ7 323 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 ANKRD10Q9NXR5 420 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 IL20RAQ9UHF4 553 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 FBXL2Q9UKC9 423 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 LRRN3E7EW58 273 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 PTGES3LE9PB15 166 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 SUSD5O60279 629 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 CCNA2P20248 432 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 APOBEC1P41238 236 aaKnown RBP18.84■□□□□ 0.61
CASC3-203ENST00000418132 ZNF41P51814 821 aaPredicted RBP18.84■□□□□ 0.61
CASC3-203ENST00000418132 CLN3Q13286 438 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 PGGHGQ32M88 737 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 PLPPR5Q32ZL2 321 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 ABHD17BQ5VST6 288 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 POMZP3Q6PJE2 187 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 THSD4Q6ZMP0 1018 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 LRRC17Q8N6Y2 441 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 OR52L1Q8NGH7 329 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 KTI12Q96EK9 354 aaPredicted RBP18.84■□□□□ 0.61
CASC3-203ENST00000418132 IL4I1Q96RQ9 567 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 NPAS1Q99742 590 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 PRRG3Q9BZD7 231 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 MCCC2Q9HCC0 563 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 WDR70Q9NW82 654 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 PAK1IP1Q9NWT1 392 aaPredicted RBP18.84■□□□□ 0.61
CASC3-203ENST00000418132 VDAC3Q9Y277 283 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 ZNF337Q9Y3M9 751 aa18.84■□□□□ 0.61
CASC3-203ENST00000418132 TMEM72A0PK05 275 aa18.83■□□□□ 0.61
CASC3-203ENST00000418132 ZNF701M0R085 212 aaPredicted RBP18.83■□□□□ 0.61
CASC3-203ENST00000418132 SNPHO15079 494 aa18.83■□□□□ 0.61
CASC3-203ENST00000418132 SNX4O95219 450 aa18.83■□□□□ 0.61
CASC3-203ENST00000418132 TMEM201Q5SNT2 666 aa18.83■□□□□ 0.61
CASC3-203ENST00000418132 GPR107Q5VW38 600 aa18.83■□□□□ 0.61
CASC3-203ENST00000418132 ERI1Q8IV48 349 aaKnown RBP18.83■□□□□ 0.61
CASC3-203ENST00000418132 TCEANCQ8N8B7 351 aa18.83■□□□□ 0.61
CASC3-203ENST00000418132 OR4K17Q8NGC6 315 aa18.83■□□□□ 0.61
CASC3-203ENST00000418132 FGF11Q92914 225 aa18.83■□□□□ 0.61
CASC3-203ENST00000418132 C1GALT1C1Q96EU7 318 aa18.83■□□□□ 0.61
CASC3-203ENST00000418132 MRGPRX4Q96LA9 322 aa18.83■□□□□ 0.61
CASC3-203ENST00000418132 DUSP21Q9H596 190 aa18.83■□□□□ 0.61
CASC3-203ENST00000418132 PTGES2Q9H7Z7 377 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms