RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 MTPNP58546 118 aa15.43■□□□□ 0.06
HSPG2-204ENST00000412328 CSNK2A1P68400 391 aaPredicted RBP15.43■□□□□ 0.06
HSPG2-204ENST00000412328 CDK6Q00534 326 aa15.43■□□□□ 0.06
HSPG2-204ENST00000412328 LARS2Q15031 903 aaKnown RBP15.43■□□□□ 0.06
HSPG2-204ENST00000412328 PDK3Q15120 406 aa15.43■□□□□ 0.06
HSPG2-204ENST00000412328 ZSWIM7Q19AV6 140 aa15.43■□□□□ 0.06
HSPG2-204ENST00000412328 GLIPR1L2Q4G1C9 344 aa15.43■□□□□ 0.06
HSPG2-204ENST00000412328 ZNF311Q5JNZ3 666 aa15.43■□□□□ 0.06
HSPG2-204ENST00000412328 GTF2IRD2BQ6EKJ0 949 aa15.43■□□□□ 0.06
HSPG2-204ENST00000412328 DHRS4L2Q6PKH6 230 aa15.43■□□□□ 0.06
HSPG2-204ENST00000412328 BEND4Q6ZU67 534 aa15.43■□□□□ 0.06
HSPG2-204ENST00000412328 ATG4DQ86TL0 474 aaPredicted RBP15.43■□□□□ 0.06
HSPG2-204ENST00000412328 MTDHQ86UE4 582 aaKnown RBP15.43■□□□□ 0.06
HSPG2-204ENST00000412328 GTF2IRD2Q86UP8 949 aa15.43■□□□□ 0.06
HSPG2-204ENST00000412328 C10orf82Q8WW14 230 aa15.43■□□□□ 0.06
HSPG2-204ENST00000412328 TACO1Q9BSH4 297 aaKnown RBP15.43■□□□□ 0.06
HSPG2-204ENST00000412328 SAR1AQ9NR31 198 aa15.43■□□□□ 0.06
HSPG2-204ENST00000412328 ST6GALNAC2Q9UJ37 374 aa15.43■□□□□ 0.06
HSPG2-204ENST00000412328 PRDM4Q9UKN5 801 aa15.43■□□□□ 0.06
HSPG2-204ENST00000412328 CORO2BQ9UQ03 480 aa15.43■□□□□ 0.06
HSPG2-204ENST00000412328 IFT52Q9Y366 437 aa15.43■□□□□ 0.06
HSPG2-204ENST00000412328 NDUFAF1Q9Y375 327 aa15.43■□□□□ 0.06
HSPG2-204ENST00000412328 ROS1P08922 2347 aa15.43■□□□□ 0.06
HSPG2-204ENST00000412328 CADP27708 2225 aa15.42■□□□□ 0.06
HSPG2-204ENST00000412328 TPST1O60507 370 aa15.42■□□□□ 0.06
HSPG2-204ENST00000412328 FKBP2P26885 142 aaKnown RBP15.42■□□□□ 0.06
HSPG2-204ENST00000412328 OR3A2P47893 321 aa15.42■□□□□ 0.06
HSPG2-204ENST00000412328 P2RY4P51582 365 aa15.42■□□□□ 0.06
HSPG2-204ENST00000412328 MAP2K6P52564 334 aa15.42■□□□□ 0.06
HSPG2-204ENST00000412328 CRYBA2P53672 197 aa15.42■□□□□ 0.06
HSPG2-204ENST00000412328 RASGEF1BQ0VAM2 473 aa15.42■□□□□ 0.06
HSPG2-204ENST00000412328 SCARB2Q14108 478 aa15.42■□□□□ 0.06
HSPG2-204ENST00000412328 POU4F3Q15319 338 aa15.42■□□□□ 0.06
HSPG2-204ENST00000412328 EXOC3L2Q2M3D2 409 aa15.42■□□□□ 0.06
HSPG2-204ENST00000412328 TMEM201Q5SNT2 666 aa15.42■□□□□ 0.06
HSPG2-204ENST00000412328 WBP2NLQ6ICG8 309 aa15.42■□□□□ 0.06
HSPG2-204ENST00000412328 REEP3Q6NUK4 255 aa15.42■□□□□ 0.06
HSPG2-204ENST00000412328 C6orf89Q6UWU4 347 aa15.42■□□□□ 0.06
HSPG2-204ENST00000412328 NINJ1Q92982 152 aa15.42■□□□□ 0.06
HSPG2-204ENST00000412328 REXO5Q96IC2 774 aaKnown RBP15.42■□□□□ 0.06
HSPG2-204ENST00000412328 HS3ST6Q96QI5 342 aa15.42■□□□□ 0.06
HSPG2-204ENST00000412328 WFDC6Q9BQY6 131 aa15.42■□□□□ 0.06
HSPG2-204ENST00000412328 OR10A4Q9H209 315 aa15.42■□□□□ 0.06
HSPG2-204ENST00000412328 KAT8Q9H7Z6 458 aaKnown RBP15.42■□□□□ 0.06
HSPG2-204ENST00000412328 C6orf203Q9P0P8 240 aaPredicted RBP15.42■□□□□ 0.06
HSPG2-204ENST00000412328 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.42■□□□□ 0.06
HSPG2-204ENST00000412328 TRAPPC4Q9Y296 219 aa15.42■□□□□ 0.06
HSPG2-204ENST00000412328 TMEM247A6NEH6 219 aa15.41■□□□□ 0.06
HSPG2-204ENST00000412328 TROVE2P10155 538 aaKnown RBP eCLIP15.41■□□□□ 0.06
HSPG2-204ENST00000412328 TFPIP10646 304 aa15.41■□□□□ 0.06
HSPG2-204ENST00000412328 UQCRBP14927 111 aa15.41■□□□□ 0.06
HSPG2-204ENST00000412328 CCNA2P20248 432 aa15.41■□□□□ 0.06
HSPG2-204ENST00000412328 COX5AP20674 150 aa15.41■□□□□ 0.06
HSPG2-204ENST00000412328 KCNJ5P48544 419 aa15.41■□□□□ 0.06
HSPG2-204ENST00000412328 IST1P53990 364 aa15.41■□□□□ 0.06
HSPG2-204ENST00000412328 HOXC5Q00444 222 aa15.41■□□□□ 0.06
HSPG2-204ENST00000412328 CXorf67Q86X51 503 aaPredicted RBP15.41■□□□□ 0.06
HSPG2-204ENST00000412328 CXXC4Q9H2H0 198 aa15.41■□□□□ 0.06
HSPG2-204ENST00000412328 TMEM181Q9P2C4 612 aa15.41■□□□□ 0.06
HSPG2-204ENST00000412328 NDRG3Q9UGV2 375 aa15.41■□□□□ 0.06
HSPG2-204ENST00000412328 PRSS50Q9UI38 385 aa15.41■□□□□ 0.06
HSPG2-204ENST00000412328 LIPT2A6NK58 231 aa15.4■□□□□ 0.06
HSPG2-204ENST00000412328 C5orf58C9J3I9 102 aa15.4■□□□□ 0.06
HSPG2-204ENST00000412328 ANGPT2O15123 496 aa15.4■□□□□ 0.06
HSPG2-204ENST00000412328 TPST2O60704 377 aa15.4■□□□□ 0.06
HSPG2-204ENST00000412328 MDH1P40925 334 aaKnown RBP15.4■□□□□ 0.06
HSPG2-204ENST00000412328 ARFIP2P53365 341 aa15.4■□□□□ 0.06
HSPG2-204ENST00000412328 EGR4Q05215 589 aa15.4■□□□□ 0.06
HSPG2-204ENST00000412328 DMTNQ08495 405 aa15.4■□□□□ 0.06
HSPG2-204ENST00000412328 BNIP2Q12982 314 aa15.4■□□□□ 0.06
HSPG2-204ENST00000412328 KLF10Q13118 480 aa15.4■□□□□ 0.06
HSPG2-204ENST00000412328 CAPRIN1Q14444 709 aaKnown RBP15.4■□□□□ 0.06
HSPG2-204ENST00000412328 TRMT5Q32P41 509 aaKnown RBP15.4■□□□□ 0.06
HSPG2-204ENST00000412328 COQ5Q5HYK3 327 aa15.4■□□□□ 0.06
HSPG2-204ENST00000412328 ANKRD34AQ69YU3 496 aa15.4■□□□□ 0.06
HSPG2-204ENST00000412328 SPNS3Q6ZMD2 512 aa15.4■□□□□ 0.06
HSPG2-204ENST00000412328 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.4■□□□□ 0.06
HSPG2-204ENST00000412328 CCDC103Q8IW40 242 aa15.4■□□□□ 0.06
HSPG2-204ENST00000412328 HIPK4Q8NE63 616 aa15.4■□□□□ 0.06
HSPG2-204ENST00000412328 DDIT4LQ96D03 193 aa15.4■□□□□ 0.06
HSPG2-204ENST00000412328 MED18Q9BUE0 208 aa15.4■□□□□ 0.06
HSPG2-204ENST00000412328 PTDSS2Q9BVG9 487 aa15.4■□□□□ 0.06
HSPG2-204ENST00000412328 POTEKPQ9BYX7 375 aa15.4■□□□□ 0.06
HSPG2-204ENST00000412328 KLHL4Q9C0H6 718 aa15.4■□□□□ 0.06
HSPG2-204ENST00000412328 ACTR6Q9GZN1 396 aa15.4■□□□□ 0.06
HSPG2-204ENST00000412328 KLHL14Q9P2G3 628 aa15.4■□□□□ 0.06
HSPG2-204ENST00000412328 MAP1AP78559 2803 aaPredicted RBP15.39■□□□□ 0.06
HSPG2-204ENST00000412328 EVPLLA8MZ36 301 aa15.39■□□□□ 0.05
HSPG2-204ENST00000412328 FTCDNL1E5RQL4 147 aa15.39■□□□□ 0.05
HSPG2-204ENST00000412328 KLF4O43474 513 aa15.39■□□□□ 0.05
HSPG2-204ENST00000412328 MFN2O95140 757 aa15.39■□□□□ 0.05
HSPG2-204ENST00000412328 ATE1O95260 518 aa15.39■□□□□ 0.05
HSPG2-204ENST00000412328 PPP3CBP16298 524 aa15.39■□□□□ 0.05
HSPG2-204ENST00000412328 SF3A3Q12874 501 aaKnown RBP eCLIP15.39■□□□□ 0.05
HSPG2-204ENST00000412328 NFYCQ13952 458 aa15.39■□□□□ 0.05
HSPG2-204ENST00000412328 TSC22D1Q15714 1073 aa15.39■□□□□ 0.05
HSPG2-204ENST00000412328 REP15Q6BDI9 236 aa15.39■□□□□ 0.05
HSPG2-204ENST00000412328 Q6ZT83 130 aa15.39■□□□□ 0.05
HSPG2-204ENST00000412328 STK32CQ86UX6 486 aa15.39■□□□□ 0.05
HSPG2-204ENST00000412328 CADM2Q8N3J6 435 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms