RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 UBQLN4Q9NRR5 601 aa11.51□□□□□ -0.57
ATG9A-203ENST00000409033 QPCTLQ9NXS2 382 aa11.51□□□□□ -0.57
ATG9A-203ENST00000409033 AK6Q9Y3D8 172 aaKnown RBP11.51□□□□□ -0.57
ATG9A-203ENST00000409033 KLK4Q9Y5K2 254 aa11.51□□□□□ -0.57
ATG9A-203ENST00000409033 COL6A3P12111 3177 aa11.51□□□□□ -0.57
ATG9A-203ENST00000409033 A0A0B4J203 849 aa11.51□□□□□ -0.57
ATG9A-203ENST00000409033 SHISA8B8ZZ34 492 aa11.51□□□□□ -0.57
ATG9A-203ENST00000409033 ADAM11O75078 769 aa11.51□□□□□ -0.57
ATG9A-203ENST00000409033 TSC22D2O75157 780 aa11.51□□□□□ -0.57
ATG9A-203ENST00000409033 GPANK1O95872 356 aa11.51□□□□□ -0.57
ATG9A-203ENST00000409033 F10P00742 488 aa11.51□□□□□ -0.57
ATG9A-203ENST00000409033 ZSWIM7Q19AV6 140 aa11.51□□□□□ -0.57
ATG9A-203ENST00000409033 ALG10Q5BKT4 473 aa11.51□□□□□ -0.57
ATG9A-203ENST00000409033 NIPAL1Q6NVV3 410 aa11.51□□□□□ -0.57
ATG9A-203ENST00000409033 LSM14AQ8ND56 463 aaKnown RBP11.51□□□□□ -0.57
ATG9A-203ENST00000409033 CDX2Q99626 313 aaPredicted RBP11.51□□□□□ -0.57
ATG9A-203ENST00000409033 KCNN2Q9H2S1 579 aa11.51□□□□□ -0.57
ATG9A-203ENST00000409033 GAREM1Q9H706 876 aa11.51□□□□□ -0.57
ATG9A-203ENST00000409033 CENPMQ9NSP4 180 aa11.51□□□□□ -0.57
ATG9A-203ENST00000409033 ASB6Q9NWX5 421 aa11.51□□□□□ -0.57
ATG9A-203ENST00000409033 PAIP2BQ9ULR5 123 aaKnown RBP11.51□□□□□ -0.57
ATG9A-203ENST00000409033 SLC35A3Q9Y2D2 325 aa11.51□□□□□ -0.57
ATG9A-203ENST00000409033 ARRDC5A6NEK1 342 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 LAMTOR5O43504 91 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 CHP2O43745 196 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 THBS1P07996 1170 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 CCKBRP32239 447 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 CLDN12P56749 244 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 NRG3P56975 720 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 SCN1BQ07699 218 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 CNIH2Q6PI25 160 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 NRARPQ7Z6K4 114 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 LUZP2Q86TE4 346 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 LNX2Q8N448 690 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 OR5M1Q8NGP8 315 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 NR4A3Q92570 626 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 MR1Q95460 341 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 TEAD3Q99594 435 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 CRB3Q9BUF7 120 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 RPH3AQ9Y2J0 694 aaPredicted RBP11.5□□□□□ -0.57
ATG9A-203ENST00000409033 TP53BP1Q12888 1972 aaPredicted RBP11.5□□□□□ -0.57
ATG9A-203ENST00000409033 PCDH15Q96QU1 1955 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 A0A075B6Q4 140 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 IGHV1OR21-1A0A087WYE8 117 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 ACOD1A6NK06 481 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 ZNF264O43296 627 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 MRPS14O60783 128 aaKnown RBP11.5□□□□□ -0.57
ATG9A-203ENST00000409033 SPARCP09486 303 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 OR8G3PP0DMU2 310 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 GBX2P52951 348 aaPredicted RBP11.5□□□□□ -0.57
ATG9A-203ENST00000409033 OR2B6P58173 313 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 E2F1Q01094 437 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 RELAQ04206 551 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 CBX3Q13185 183 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 PRAMEF20Q5VT98 475 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 NXNL2Q5VZ03 156 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 ARHGAP11AQ6P4F7 1023 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 MZT2AQ6P582 158 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 FAM199XQ6PEV8 388 aaPredicted RBP11.5□□□□□ -0.57
ATG9A-203ENST00000409033 PLET1Q6UQ28 207 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 SERPINA12Q8IW75 414 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 ZNF676Q8N7Q3 588 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 NDEL1Q9GZM8 345 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 METTL7AQ9H8H3 244 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 IL20Q9NYY1 176 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 ACAD8Q9UKU7 415 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 A0A087WV62 115 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 E9PI62 339 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 SCRG1O75711 98 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 C3orf38Q5JPI3 329 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 LYSMD2Q8IV50 215 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 MFSD4AQ8N468 514 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 UXS1Q8NBZ7 420 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 TSEN15Q8WW01 171 aaKnown RBP11.5□□□□□ -0.57
ATG9A-203ENST00000409033 NUDT9Q9BW91 350 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 SLC25A19Q9HC21 320 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 PCDHGA3Q9Y5H0 932 aa11.5□□□□□ -0.57
ATG9A-203ENST00000409033 TMEM72A0PK05 275 aa11.49□□□□□ -0.57
ATG9A-203ENST00000409033 ZNF670-ZNF695F2Z2N8 137 aa11.49□□□□□ -0.57
ATG9A-203ENST00000409033 GDF9O60383 454 aa11.49□□□□□ -0.57
ATG9A-203ENST00000409033 NKX2-2O95096 273 aa11.49□□□□□ -0.57
ATG9A-203ENST00000409033 SPNP16150 400 aa11.49□□□□□ -0.57
ATG9A-203ENST00000409033 PRKCAP17252 672 aa11.49□□□□□ -0.57
ATG9A-203ENST00000409033 SFTPDP35247 375 aa11.49□□□□□ -0.57
ATG9A-203ENST00000409033 OR10A3P58181 314 aa11.49□□□□□ -0.57
ATG9A-203ENST00000409033 NXPH1P58417 271 aa11.49□□□□□ -0.57
ATG9A-203ENST00000409033 ZNF45Q02386 682 aa11.49□□□□□ -0.57
ATG9A-203ENST00000409033 PRAMEF8Q5VWM4 474 aa11.49□□□□□ -0.57
ATG9A-203ENST00000409033 C1QL3Q5VWW1 255 aa11.49□□□□□ -0.57
ATG9A-203ENST00000409033 PRAMEF7Q5VXH5 474 aa11.49□□□□□ -0.57
ATG9A-203ENST00000409033 NIPAL3Q6P499 406 aa11.49□□□□□ -0.57
ATG9A-203ENST00000409033 Q8N402 240 aa11.49□□□□□ -0.57
ATG9A-203ENST00000409033 POMGNT2Q8NAT1 580 aa11.49□□□□□ -0.57
ATG9A-203ENST00000409033 CEP76Q8TAP6 659 aa11.49□□□□□ -0.57
ATG9A-203ENST00000409033 CHPT1Q8WUD6 406 aa11.49□□□□□ -0.57
ATG9A-203ENST00000409033 DCLRE1CQ96SD1 692 aaKnown RBP11.49□□□□□ -0.57
ATG9A-203ENST00000409033 CNN2Q99439 309 aaKnown RBP11.49□□□□□ -0.57
ATG9A-203ENST00000409033 BABAM2Q9NXR7 383 aa11.49□□□□□ -0.57
ATG9A-203ENST00000409033 DNAJB12Q9NXW2 375 aaKnown RBP11.49□□□□□ -0.57
ATG9A-203ENST00000409033 RARRES3Q9UL19 164 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms