RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 ALG8Q9BVK2 526 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 GPATCH2Q9NW75 528 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 FAM240BA0A1B0GVZ2 78 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 A0A1W2PQ72 361 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 TCRBV5S2A0A599 114 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 OR6C76A6NM76 312 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 A8MVM7 634 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 CT62P0C5K7 136 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 MAPK3P27361 379 aaPredicted RBP8.36□□□□□ -1.07
LIG4-202ENST00000405925 MRPL19P49406 292 aaKnown RBP8.36□□□□□ -1.07
LIG4-202ENST00000405925 RPS18P62269 152 aaKnown RBP8.36□□□□□ -1.07
LIG4-202ENST00000405925 PRTGQ2VWP7 1150 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.36□□□□□ -1.07
LIG4-202ENST00000405925 C22orf42Q6IC83 251 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 KLHL17Q6TDP4 642 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 TMPPEQ6ZT21 453 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 CEACAM19Q7Z692 300 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 CALHM3Q86XJ0 350 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 CNEP1R1Q8N9A8 125 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 PNLDC1Q8NA58 520 aaKnown RBP8.36□□□□□ -1.07
LIG4-202ENST00000405925 PFN4Q8NHR9 129 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 C1orf216Q8TAB5 229 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 ISOC1Q96CN7 298 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 KLHL15Q96M94 604 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 B3GNT4Q9C0J1 378 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 P4HTMQ9NXG6 502 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 FKBP7Q9Y680 259 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 TEX51A0A1B0GUA7 166 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 CD8B2A6NJW9 211 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 KLRC4-KLRK1H3BQV0 150 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 ITGA5P08648 1049 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 CD8BP10966 210 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 FPR3P25089 353 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 MSX1P28360 303 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 EVI2BP34910 448 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 EIF1P41567 113 aaKnown RBP8.36□□□□□ -1.07
LIG4-202ENST00000405925 PNLIPRP2P54317 469 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 ILKQ13418 452 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 UGT2A3Q6UWM9 527 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 YRDCQ86U90 279 aaKnown RBP8.36□□□□□ -1.07
LIG4-202ENST00000405925 GRAMD2AQ8IUY3 354 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 OR4F15Q8NGB8 312 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 TMEM163Q8TC26 289 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 ZG16BQ96DA0 208 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 LGALS12Q96DT0 336 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 UBAP1Q9NZ09 502 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 SDK2Q58EX2 2172 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 PI4KAP42356 2102 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 FRG2CA6NGY1 282 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 ERGP11308 486 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 SLC1A3P43003 542 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 CSRP3P50461 194 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 UBE2NP61088 152 aaKnown RBP8.36□□□□□ -1.07
LIG4-202ENST00000405925 PRICKLE4Q2TBC4 344 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 ZNF628Q5EBL2 1059 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 TMEM201Q5SNT2 666 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 FAM69AQ5T7M9 428 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 C1orf140Q5VVS0 124 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 PRSS42Q7Z5A4 293 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 PAPD5Q8NDF8 572 aaKnown RBP8.36□□□□□ -1.07
LIG4-202ENST00000405925 UBE2FQ969M7 185 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 INTS14Q96SY0 518 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 FUNDC2Q9BWH2 189 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 ULBP2Q9BZM5 246 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 SEMA4CQ9C0C4 833 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 ANKRD19PQ9H560 264 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 ZNF768Q9H5H4 540 aaKnown RBP8.36□□□□□ -1.07
LIG4-202ENST00000405925 SIRT3Q9NTG7 399 aaPredicted RBP8.36□□□□□ -1.07
LIG4-202ENST00000405925 CORINQ9Y5Q5 1042 aa8.36□□□□□ -1.07
LIG4-202ENST00000405925 ALPK2Q86TB3 2170 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 KLK10O43240 276 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 NKX2-2O95096 273 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 WDPCPO95876 746 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 RFC3P40938 356 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 CXCR4P61073 352 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 PSPHP78330 225 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 HNRNPA0Q13151 305 aaKnown RBP8.35□□□□□ -1.07
LIG4-202ENST00000405925 NHSL2Q5HYW2 709 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 C9orf135Q5VTT2 229 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 PIWIL3Q7Z3Z3 882 aaKnown RBP8.35□□□□□ -1.07
LIG4-202ENST00000405925 GALNT15Q8N3T1 639 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 SAP25Q8TEE9 199 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 HTRA1Q92743 480 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 TMIGD2Q96BF3 282 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 Q96M85 177 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 OR11A1Q9GZK7 315 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 UBQLN3Q9H347 655 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 KDM4EB2RXH2 506 aaPredicted RBP8.35□□□□□ -1.07
LIG4-202ENST00000405925 CLPXO76031 633 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 IGHG1P01857 330 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 IFNA6P05013 189 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 CD14P08571 375 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 CRHBPP24387 322 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 WNT4P56705 351 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 FOXL2P58012 376 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 CAMK2DQ13557 499 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 MELKQ14680 651 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 DEFB109BQ30KR1 87 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 ZNF404Q494X3 552 aa8.35□□□□□ -1.07
LIG4-202ENST00000405925 HSD17B12Q53GQ0 312 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms