RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 SYNPO2LQ9H987 977 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 NOX4Q9NPH5 578 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 NRIP3Q9NQ35 241 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 IFT46Q9NQC8 304 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 GNG8Q9UK08 70 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 ACSL5Q9ULC5 683 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 SLC35A3Q9Y2D2 325 aa12.91□□□□□ -0.34
APOB-202ENST00000399256 ACOD1A6NK06 481 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 GABARAPH6UMI1 98 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 PCCBP05166 539 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 SLC35G4P0C7Q5 338 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 ZNF3P17036 446 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 EN2P19622 333 aaPredicted RBP12.9□□□□□ -0.34
APOB-202ENST00000399256 EDNRAP25101 427 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 NDUFS1P28331 727 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 UBE2MP61081 183 aaKnown RBP12.9□□□□□ -0.34
APOB-202ENST00000399256 ERVK-21P61565 698 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 SEC61A1P61619 476 aaKnown RBP12.9□□□□□ -0.34
APOB-202ENST00000399256 PRDX1Q06830 199 aaKnown RBP12.9□□□□□ -0.34
APOB-202ENST00000399256 TMEM35AQ53FP2 167 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 BVESQ8NE79 360 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 SCARB1Q8WTV0 552 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 THEM6Q8WUY1 208 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 FCAMRQ8WWV6 532 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 LDAHQ9H6V9 325 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 MTHFD2LQ9H903 347 aaPredicted RBP12.9□□□□□ -0.34
APOB-202ENST00000399256 PLEKHA1Q9HB21 404 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 GPR160Q9UJ42 338 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 SIGLEC7Q9Y286 467 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 HCFC2Q9Y5Z7 792 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 ABHD14A-ACY1A0A1B0GW23 586 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 B3GALNT1O75752 331 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 HSD17B2P37059 387 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 AP3S2P59780 193 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 EEF1A1P68104 462 aaKnown RBP12.9□□□□□ -0.34
APOB-202ENST00000399256 ELFN2Q5R3F8 820 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 MFSD12Q6NUT3 480 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 OVCH1Q7RTY7 1134 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 OR5M1Q8NGP8 315 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 OR2A1Q8NGT9 310 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 ZNF681Q96N22 645 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 ANKRD10Q9NXR5 420 aa12.9□□□□□ -0.34
APOB-202ENST00000399256 AKAP7Q9P0M2 348 aaPredicted RBP12.9□□□□□ -0.34
APOB-202ENST00000399256 NAP1L6A6NFF2 107 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 KDM4BO94953 1096 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 PLATP00750 562 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 FGF2P09038 288 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 ARFIP1P53367 373 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 ST8SIA6P61647 398 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 RPS15P62841 145 aaKnown RBP12.89□□□□□ -0.35
APOB-202ENST00000399256 ACTC1P68032 377 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 ACTA1P68133 377 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 MESP2Q0VG99 397 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 ZIC1Q15915 447 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 DUSP5Q16690 384 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 C2orf68Q2NKX9 166 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 ZNF626Q68DY1 528 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 C17orf107Q6ZR85 190 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 GRHL3Q8TE85 626 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 ST8SIA2Q92186 375 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 SEMA4CQ9C0C4 833 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 PITHD1Q9GZP4 211 aaPredicted RBP12.89□□□□□ -0.35
APOB-202ENST00000399256 MED9Q9NWA0 146 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 TAS2R10Q9NYW0 307 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 TAS2R5Q9NYW4 299 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 CXXC1Q9P0U4 656 aaPredicted RBP12.89□□□□□ -0.35
APOB-202ENST00000399256 OR6C65A6NJZ3 312 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 OGG1O15527 345 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 FMO6PO60774 539 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 APOC3P02656 99 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 ADRB3P13945 408 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 CPN1P15169 458 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 TYRP1P17643 537 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 SIRPAP78324 504 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 DEFB103AP81534 67 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 MRPL2Q5T653 305 aaKnown RBP12.89□□□□□ -0.35
APOB-202ENST00000399256 METRNLQ641Q3 311 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 OR4N5Q8IXE1 308 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 CDK20Q8IZL9 346 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 SNX33Q8WV41 574 aa12.89□□□□□ -0.35
APOB-202ENST00000399256 GPN1Q9HCN4 374 aaPredicted RBP12.89□□□□□ -0.35
APOB-202ENST00000399256 PTPRSQ13332 1948 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 PSMD9O00233 223 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 ACRP10323 421 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 SRMP19623 302 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 TMEM69Q5SWH9 247 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 ZNF765Q7L2R6 523 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 ZNF454Q8N9F8 522 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 SDR9C7Q8NEX9 313 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 OR2L5Q8NG80 312 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 C1orf216Q8TAB5 229 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 SLC6A20Q9NP91 592 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 MRPS30Q9NP92 439 aaKnown RBP12.88□□□□□ -0.35
APOB-202ENST00000399256 FBXO34Q9NWN3 711 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 APOBEC3BQ9UH17 382 aaKnown RBP12.88□□□□□ -0.35
APOB-202ENST00000399256 MDC1Q14676 2089 aaKnown RBP12.88□□□□□ -0.35
APOB-202ENST00000399256 PEX12O00623 359 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 PIN1P1O15428 100 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 OR2A4O95047 310 aa12.88□□□□□ -0.35
APOB-202ENST00000399256 PRNPP04156 253 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms