RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 WASH6PQ9NQA3 447 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 PAQR5Q9NXK6 330 aaPredicted RBP13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 FAM183AA6NL82 134 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 H7C2Y5 167 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 ZNF749O43361 778 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 HSD17B1P14061 328 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 SPOCK1Q08629 439 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 FAM57BQ71RH2 274 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 GPR155Q7Z3F1 870 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 LSMEM2Q8N112 164 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 DUSP19Q8WTR2 217 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 VRK1Q99986 396 aaPredicted RBP13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 PCED1AQ9H1Q7 454 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 A6NIN4 97 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 METTL12A8MUP2 240 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 AHRP35869 848 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 OPRD1P41143 372 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 WNT4P56705 351 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 MS4A2Q01362 244 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 CNN3Q15417 329 aaKnown RBP13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 BCL2A1Q16548 175 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 KCTD20Q7Z5Y7 419 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 SGPP2Q8IWX5 399 aa13.26□□□□□ -0.29
PCDHA11-201ENST00000398640 OR2T1O43869 369 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 DOK2O60496 412 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 CX3CR1P49238 355 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 HLCSP50747 726 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 GABARAPL2P60520 117 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 OR1Q1Q15612 314 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 HLA-BQ31612 363 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 LILRA6Q6PI73 481 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 CCBE1Q6UXH8 406 aaPredicted RBP13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 CHDHQ8NE62 594 aaPredicted RBP13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 WBP2Q969T9 261 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 SEMA6CQ9H3T2 930 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 C1GALT1Q9NS00 363 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 TAS2R8Q9NYW2 309 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 KLHL42Q9P2K6 505 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 PLEKHM1Q9Y4G2 1056 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 TNFSF15O95150 251 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 PTAFRP25105 342 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 RFLNAQ6ZTI6 216 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 SIRT6Q8N6T7 355 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 DEFB124Q8NES8 71 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 IGHV3-20A0A0C4DH32 117 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 SUSD5O60279 629 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 IGHG1P01857 330 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 LAIR1Q6GTX8 287 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 LCN10Q6JVE6 187 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 MRPL41Q8IXM3 137 aaKnown RBP13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 FAM83FQ8NEG4 500 aaPredicted RBP13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 BTBD2Q9BX70 525 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 SAP130Q9H0E3 1048 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 APMAPQ9HDC9 416 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 TEX10Q9NXF1 929 aaPredicted RBP13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 APOC3P02656 99 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 HIST1H1TP22492 207 aaPredicted RBP13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 KCNAB1Q14722 419 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 PGBD5Q8N414 524 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 OR5D14Q8NGL3 314 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 BORCS7Q96B45 105 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 VAPAQ9P0L0 249 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 LOXL2Q9Y4K0 774 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 H0Y8X5 98 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 KLRC4-KLRK1H3BQV0 150 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 UBFD1O14562 309 aaKnown RBP13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 CDK4P11802 303 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 MSR1P21757 451 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 AOAHP28039 575 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 PPP5CP53041 499 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 EXOSC6Q5RKV6 272 aaKnown RBP13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 Q6ZNB5 142 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 PRSS48Q7RTY5 328 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 HSD17B8Q92506 261 aa13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 CNOT11Q9UKZ1 510 aaKnown RBP13.25□□□□□ -0.29
PCDHA11-201ENST00000398640 CD300LBA8K4G0 201 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 B4GALT3O60512 393 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 RAB3DO95716 219 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 PTPN6P29350 595 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 AAED1Q7RTV5 226 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 PRICKLE2Q7Z3G6 844 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 MFSD9Q8NBP5 474 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 OR1E3Q8WZA6 343 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 UCN3Q969E3 161 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 ZNF597Q96LX8 424 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 DEFB127Q9H1M4 99 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 SERTAD4Q9NUC0 356 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 TMEM100Q9NV29 134 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 HIF1ANQ9NWT6 349 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 OR6C6A6NF89 314 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 BOLA2-SMG1P6H3BVE0 249 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 GABRG2P18507 467 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 SYPL1Q16563 259 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 ETFBKMTQ8IXQ9 262 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 ASCC1Q8N9N2 400 aaKnown RBP13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 PAPD5Q8NDF8 572 aaKnown RBP13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 TMIGD2Q96BF3 282 aa13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 ZNF300Q96RE9 604 aaPredicted RBP13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 RPP25Q9BUL9 199 aaKnown RBP13.24□□□□□ -0.29
PCDHA11-201ENST00000398640 FAM234AQ9H0X4 552 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms