RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 SLC43A2Q8N370 569 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 LNX2Q8N448 690 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 LRRC75AQ8NAA5 344 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 MOGAT1Q96PD6 335 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 TSSK6Q9BXA6 273 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 PSORS1C1Q9UIG5 152 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 TMED7Q9Y3B3 224 aa11.53□□□□□ -0.56
TRIM39-204ENST00000396548 NCKAP5O14513 1909 aa11.52□□□□□ -0.56
TRIM39-204ENST00000396548 FRYQ5TBA9 3013 aa11.52□□□□□ -0.56
TRIM39-204ENST00000396548 KNTC1P50748 2209 aa11.52□□□□□ -0.56
TRIM39-204ENST00000396548 TRAV27A0A087WT01 109 aa11.52□□□□□ -0.57
TRIM39-204ENST00000396548 ZC3H12DA2A288 527 aaKnown RBP11.52□□□□□ -0.57
TRIM39-204ENST00000396548 SLC22A10Q63ZE4 541 aa11.52□□□□□ -0.57
TRIM39-204ENST00000396548 PTCHD4Q6ZW05 846 aa11.52□□□□□ -0.57
TRIM39-204ENST00000396548 BPIFB6Q8NFQ5 453 aa11.52□□□□□ -0.57
TRIM39-204ENST00000396548 OR8J1Q8NGP2 316 aa11.52□□□□□ -0.57
TRIM39-204ENST00000396548 C1GALT1C1Q96EU7 318 aa11.52□□□□□ -0.57
TRIM39-204ENST00000396548 TMEM41AQ96HV5 264 aa11.52□□□□□ -0.57
TRIM39-204ENST00000396548 LHPPQ9H008 270 aa11.52□□□□□ -0.57
TRIM39-204ENST00000396548 ADNPQ9H2P0 1102 aa11.52□□□□□ -0.57
TRIM39-204ENST00000396548 TBC1D23Q9NUY8 699 aa11.52□□□□□ -0.57
TRIM39-204ENST00000396548 HPF1Q9NWY4 346 aa11.52□□□□□ -0.57
TRIM39-204ENST00000396548 ZNF337Q9Y3M9 751 aa11.52□□□□□ -0.57
TRIM39-204ENST00000396548 SH3D21A4FU49 640 aa11.52□□□□□ -0.57
TRIM39-204ENST00000396548 SNPHO15079 494 aa11.52□□□□□ -0.57
TRIM39-204ENST00000396548 HCN1O60741 890 aa11.52□□□□□ -0.57
TRIM39-204ENST00000396548 PCMT1P22061 227 aa11.52□□□□□ -0.57
TRIM39-204ENST00000396548 UQCRC1P31930 480 aa11.52□□□□□ -0.57
TRIM39-204ENST00000396548 GRK5P34947 590 aa11.52□□□□□ -0.57
TRIM39-204ENST00000396548 XAF1Q6GPH4 301 aa11.52□□□□□ -0.57
TRIM39-204ENST00000396548 OAFQ86UD1 273 aa11.52□□□□□ -0.57
TRIM39-204ENST00000396548 VASH2Q86V25 355 aa11.52□□□□□ -0.57
TRIM39-204ENST00000396548 STK35Q8TDR2 534 aa11.52□□□□□ -0.57
TRIM39-204ENST00000396548 KIAA1143Q96AT1 154 aaPredicted RBP11.52□□□□□ -0.57
TRIM39-204ENST00000396548 GPX7Q96SL4 187 aaPredicted RBP11.52□□□□□ -0.57
TRIM39-204ENST00000396548 TVP23BQ9NYZ1 205 aa11.52□□□□□ -0.57
TRIM39-204ENST00000396548 IL20RAQ9UHF4 553 aa11.52□□□□□ -0.57
TRIM39-204ENST00000396548 PCDHGB1Q9Y5G3 927 aa11.52□□□□□ -0.57
TRIM39-204ENST00000396548 RIF1Q5UIP0 2472 aaKnown RBP11.51□□□□□ -0.57
TRIM39-204ENST00000396548 A0A087WXM4 84 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 RCBTB2O95199 551 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 CH25HO95992 272 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 CLPTM1O96005 669 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 ADRA2AP08913 450 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 APOBEC1P41238 236 aaKnown RBP11.51□□□□□ -0.57
TRIM39-204ENST00000396548 TBC1D25Q3MII6 688 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 CRTC2Q53ET0 693 aaPredicted RBP11.51□□□□□ -0.57
TRIM39-204ENST00000396548 CLEC12AQ5QGZ9 265 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 PRAMEF20Q5VT98 475 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 C1QL3Q5VWW1 255 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 TMEM156Q8N614 296 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 OR2T33Q8NG76 320 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 TMEM163Q8TC26 289 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 TMEM234Q8WY98 164 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 FER1L6-AS2Q96M78 137 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 HIF3AQ9Y2N7 669 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 A0A0G2JMM0 328 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 A0A1W2PPB8 328 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 A0A1W2PRS3 328 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 KIR3DP1A8MWS1 328 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 SUSD5O60279 629 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 ENTPD6O75354 484 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 SLC34A2O95436 690 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 NUDT14O95848 222 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 SAGP10523 405 aaPredicted RBP11.51□□□□□ -0.57
TRIM39-204ENST00000396548 CXCR1P25024 350 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 FOXF1Q12946 379 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 CASP12Q6UXS9 341 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 PLCZ1Q86YW0 608 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 SPARTQ8N0X7 666 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 TCEANCQ8N8B7 351 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 OR6S1Q8NH40 331 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 GGHQ92820 318 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 MRGPRX4Q96LA9 322 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 IL4I1Q96RQ9 567 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 IMPAD1Q9NX62 359 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 TRAV36DV7A0A075B6V5 113 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 KDM4EB2RXH2 506 aaPredicted RBP11.51□□□□□ -0.57
TRIM39-204ENST00000396548 FTCDNL1E5RQL4 147 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 CDK2AP1O14519 115 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 ZNF208O43345 1280 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 MRPS14O60783 128 aaKnown RBP11.51□□□□□ -0.57
TRIM39-204ENST00000396548 NEURL1O76050 574 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 ATP6V1B1P15313 513 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 IL11P20809 199 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 PIGFQ07326 219 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 TUBA3CQ13748 450 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 SYT14P1Q58G82 188 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 FOXB2Q5VYV0 432 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 TUBA3EQ6PEY2 450 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 BCDIN3DQ7Z5W3 292 aaKnown RBP11.51□□□□□ -0.57
TRIM39-204ENST00000396548 OR51A7Q8NH64 312 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 ERVK-18Q9QC07 812 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 CHRNA9Q9UGM1 479 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 ZNF229Q9UJW7 825 aa11.51□□□□□ -0.57
TRIM39-204ENST00000396548 FAM186AA6NE01 2351 aa11.5□□□□□ -0.57
TRIM39-204ENST00000396548 DCDC2BA2VCK2 349 aa11.5□□□□□ -0.57
TRIM39-204ENST00000396548 TRABD2BA6NFA1 517 aa11.5□□□□□ -0.57
TRIM39-204ENST00000396548 CLCA1A8K7I4 914 aa11.5□□□□□ -0.57
TRIM39-204ENST00000396548 A8MVM7 634 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms