RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 PGRMC1O00264 195 aaKnown RBP3.2□□□□□ -1.9
XRN1-202ENST00000392981 LSM8O95777 96 aaKnown RBP3.2□□□□□ -1.9
XRN1-202ENST00000392981 PTTG1O95997 202 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 CT45A8P0DMV1 189 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 CT45A9P0DMV2 189 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 CDK16Q00536 496 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 LAPTM4AQ15012 233 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 ZNHIT3Q15649 155 aaPredicted RBP3.2□□□□□ -1.9
XRN1-202ENST00000392981 CT45A2Q5DJT8 189 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 ZNF836Q6ZNA1 936 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 PGAP1Q75T13 922 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 FCRLAQ7L513 359 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 MRPL10Q7Z7H8 261 aaKnown RBP3.2□□□□□ -1.9
XRN1-202ENST00000392981 PARGQ86W56 976 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 LINC00482Q8N8I6 264 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 OR4C5Q8NGB2 326 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 BLOC1S5Q8TDH9 187 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 NRGNQ92686 78 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 TMEM19Q96HH6 336 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 MCRIP2Q9BUT9 160 aaKnown RBP3.2□□□□□ -1.9
XRN1-202ENST00000392981 TDRD3Q9H7E2 651 aaKnown RBP3.2□□□□□ -1.9
XRN1-202ENST00000392981 SERTAD4Q9NUC0 356 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 NLGN3Q9NZ94 848 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 SLC2A6Q9UGQ3 507 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 SIX4Q9UIU6 781 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 ST6GALNAC2Q9UJ37 374 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 AP3M1Q9Y2T2 418 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 OR2W1Q9Y3N9 320 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 OARD1Q9Y530 152 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 ZNF142P52746 1687 aaPredicted RBP3.19□□□□□ -1.9
XRN1-202ENST00000392981 INSRP06213 1382 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 MTMR11A4FU01 709 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 FABP12A6NFH5 140 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 PFDN6O15212 129 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 SIGLEC5O15389 551 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 ZNHIT1O43257 154 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 AQP9O43315 295 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 TRAPPC6AO75865 159 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 CALB1P05937 261 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 MYOD1P15172 320 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 RAB10P61026 200 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 GABPAQ06546 454 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 MOGQ16653 247 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 OGFRL1Q5TC84 451 aaPredicted RBP3.19□□□□□ -1.9
XRN1-202ENST00000392981 PAPD7Q5XG87 772 aaKnown RBP3.19□□□□□ -1.9
XRN1-202ENST00000392981 MRPL21Q7Z2W9 205 aaKnown RBP3.19□□□□□ -1.9
XRN1-202ENST00000392981 MRPL55Q7Z7F7 128 aaKnown RBP3.19□□□□□ -1.9
XRN1-202ENST00000392981 HIPK1Q86Z02 1210 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 IFT20Q8IY31 132 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 ZNF34Q8IZ26 560 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 CPSF7Q8N684 471 aaKnown RBP3.19□□□□□ -1.9
XRN1-202ENST00000392981 FAM84BQ96KN1 310 aaPredicted RBP3.19□□□□□ -1.9
XRN1-202ENST00000392981 ZNF597Q96LX8 424 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 FOXN4Q96NZ1 517 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 RMND1Q9NWS8 449 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 HRASLS2Q9NWW9 162 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 ANAPC7Q9UJX3 599 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 SELENOKQ9Y6D0 94 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 CDH10Q9Y6N8 788 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 GAPVD1Q14C86 1478 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 DNMT1P26358 1616 aaKnown RBP3.19□□□□□ -1.9
XRN1-202ENST00000392981 QRICH2Q9H0J4 1663 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 CLEC18AA5D8T8 446 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 SHISA7A6NL88 538 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 H3BN98 237 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 TSPAN2O60636 221 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 UGT1A9O60656 530 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 SEMA7AO75326 666 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 NPR2P20594 1047 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 FOLR3P41439 243 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 NPBWR2P48146 333 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 SERPINB10P48595 397 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 HSPA13P48723 471 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 GNG10P50151 68 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 XKP51811 444 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 KLRC3Q07444 240 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 FADDQ13158 208 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 MIDNQ504T8 468 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 SLC25A53Q5H9E4 307 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 PDSS1Q5T2R2 415 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 TCEAL6Q6IPX3 200 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 CLEC18BQ6UXF7 455 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 ABHD13Q7L211 337 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 POLNQ7Z5Q5 900 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 PRR22Q8IZ63 422 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 STX19Q8N4C7 294 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 CLEC18CQ8NCF0 446 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 OR2L3Q8NG85 312 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 MRGPRFQ96AM1 343 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 NSMCE3Q96MG7 304 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 LRRC3BQ96PB8 259 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 SIGLEC11Q96RL6 698 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 TESK2Q96S53 571 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 CYP2S1Q96SQ9 504 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 CCDC90BQ9GZT6 254 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 MCOLN1Q9GZU1 580 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 ARMC7Q9H6L4 198 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 NRN1Q9NPD7 142 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 TRMT112Q9UI30 125 aaKnown RBP3.19□□□□□ -1.9
XRN1-202ENST00000392981 YARS2Q9Y2Z4 477 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms