RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 CASD1Q96PB1 797 aa11.25□□□□□ -0.61
HERC6-203ENST00000380265 MNTQ99583 582 aa11.25□□□□□ -0.61
HERC6-203ENST00000380265 CALML5Q9NZT1 146 aa11.25□□□□□ -0.61
HERC6-203ENST00000380265 COMMD9Q9P000 198 aa11.25□□□□□ -0.61
HERC6-203ENST00000380265 PURGQ9UJV8 347 aaKnown RBP11.25□□□□□ -0.61
HERC6-203ENST00000380265 HS3ST2Q9Y278 367 aa11.25□□□□□ -0.61
HERC6-203ENST00000380265 ACOT7O00154 380 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 S100A9P06702 114 aaKnown RBP11.24□□□□□ -0.61
HERC6-203ENST00000380265 GTF2F2P13984 249 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 CPN1P15169 458 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 SRMP19623 302 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 NT5EP21589 574 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 HOXA1P49639 335 aaPredicted RBP11.24□□□□□ -0.61
HERC6-203ENST00000380265 UBE2IP63279 158 aaKnown RBP11.24□□□□□ -0.61
HERC6-203ENST00000380265 DMKNQ6E0U4 476 aaPredicted RBP11.24□□□□□ -0.61
HERC6-203ENST00000380265 RAB11FIP2Q7L804 512 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 RANBP3LQ86VV4 465 aaPredicted RBP11.24□□□□□ -0.61
HERC6-203ENST00000380265 FAM129CQ86XR2 697 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 BEST3Q8N1M1 668 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 NSMAFQ92636 917 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 SCLYQ96I15 445 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 TIMP4Q99727 224 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 XKR8Q9H6D3 395 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 BIN3Q9NQY0 253 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 PPIL1Q9Y3C6 166 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 OR2M5A3KFT3 312 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 OR14I1A6ND48 311 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 SYT5O00445 386 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 SGCEO43556 437 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 PAK4O96013 591 aaPredicted RBP11.24□□□□□ -0.61
HERC6-203ENST00000380265 VSIG10L2P0DP72 767 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 SIRPAP78324 504 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 PXKQ7Z7A4 578 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 TMPRSS12Q86WS5 348 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 IFNL1Q8IU54 200 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 MUC20Q8N307 709 aaPredicted RBP11.24□□□□□ -0.61
HERC6-203ENST00000380265 NANPQ8TBE9 248 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 HAVCR2Q8TDQ0 301 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 TMEM239Q8WW34 195 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 DVL3Q92997 716 aaPredicted RBP11.24□□□□□ -0.61
HERC6-203ENST00000380265 PNPLA2Q96AD5 504 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 ZNF559Q9BR84 538 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 SLITRK2Q9H156 845 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 FKRPQ9H9S5 495 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 ATG4BQ9Y4P1 393 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 VWA8A3KMH1 1905 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 TRAV20A0A0B4J274 112 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 A0A1W2PRU2 124 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 LCMT2O60294 686 aaKnown RBP11.24□□□□□ -0.61
HERC6-203ENST00000380265 NDUFB6O95139 128 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 UBXN2BQ14CS0 331 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 ZCCHC12Q6PEW1 402 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 LCTLQ6UWM7 567 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 KRT77Q7Z794 578 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 SLC16A11Q8NCK7 471 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 THAP6Q8TBB0 222 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 NR4A3Q92570 626 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 CDS1Q92903 461 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 FN3KQ9H479 309 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 KLHL31Q9H511 634 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 ADGRL4Q9HBW9 690 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 INPP5EQ9NRR6 644 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 ZNF780BQ9Y6R6 833 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 MYOFQ9NZM1 2061 aa11.24□□□□□ -0.61
HERC6-203ENST00000380265 ARID1AO14497 2285 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 TRAV1-2A0A0B4J238 106 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 IFITM5A6NNB3 132 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 FAM171A2A8MVW0 826 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 EMC8O43402 210 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 LATS1O95835 1130 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 TBX6O95947 436 aaPredicted RBP11.23□□□□□ -0.61
HERC6-203ENST00000380265 HPP00738 406 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 IFNGP01579 166 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 CSN2P05814 226 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 ASGR2P07307 311 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 LIPCP11150 499 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 CBR1P16152 277 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 ITPKBP27987 946 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 ACADLP28330 430 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 MPIP34949 423 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 RPL4P36578 427 aaKnown RBP11.23□□□□□ -0.61
HERC6-203ENST00000380265 PRMT2P55345 433 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 BLOC1S1P78537 153 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 MAT1AQ00266 395 aaKnown RBP11.23□□□□□ -0.61
HERC6-203ENST00000380265 DUSP2Q05923 314 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 SOCS4Q8WXH5 440 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 CNRIP1Q96F85 164 aaPredicted RBP11.23□□□□□ -0.61
HERC6-203ENST00000380265 ARHGDIGQ99819 225 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 CMSS1Q9BQ75 279 aaKnown RBP11.23□□□□□ -0.61
HERC6-203ENST00000380265 TREM1Q9NP99 234 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 V9GY05 133 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 SNRPGP15A8MWD9 76 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 SELENOFO60613 162 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 MAS1P04201 325 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 THY1P04216 161 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 MEOX2P50222 304 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 RAB13P51153 203 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 ACTC1P68032 377 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 ACTA1P68133 377 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 CDK5R1Q15078 307 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms