RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 NOX3Q9HBY0 568 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 MIEF1Q9NQG6 463 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 MRPL15Q9P015 296 aaKnown RBP6.93□□□□□ -1.3
CDKL5-201ENST00000379989 CACNG4Q9UBN1 327 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 GRHPRQ9UBQ7 328 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 MOKQ9UQ07 419 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 CCL27Q9Y4X3 112 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 RFXANKO14593 260 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 SCN2BO60939 215 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 DIRAS3O95661 229 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 PTBP3O95758 552 aaKnown RBP6.93□□□□□ -1.3
CDKL5-201ENST00000379989 SFTPBP07988 381 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 C1SP09871 688 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 NR2F6P10588 404 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 WNT3P56703 355 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 EGR3Q06889 387 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 SCGB2B2Q4G0G5 96 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 TMEM244Q5VVB8 128 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 ADAM5Q6NVV9 412 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 LPCAT3Q6P1A2 487 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 ABHD13Q7L211 337 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 BEND2Q8NDZ0 799 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 FIBINQ8TAL6 211 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 FAM122AQ96E09 287 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 ZFP3Q96NJ6 502 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 MTERF1Q99551 399 aaKnown RBP6.93□□□□□ -1.3
CDKL5-201ENST00000379989 MENTQ9BUN1 341 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 TRMT61BQ9BVS5 477 aaKnown RBP6.93□□□□□ -1.3
CDKL5-201ENST00000379989 SNHG12Q9BXW3 62 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 NRSN2Q9GZP1 204 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 RNF208Q9H0X6 261 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 ZBP1Q9H171 429 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 IL23AQ9NPF7 189 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 FAM86C1Q9NVL1 165 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 MARCH4Q9P2E8 410 aaPredicted RBP6.93□□□□□ -1.3
CDKL5-201ENST00000379989 ANAPC1Q9H1A4 1944 aa6.93□□□□□ -1.3
CDKL5-201ENST00000379989 GNG14A0A1W2PPG7 69 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 DUXAA6NLW8 204 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 CCL22O00626 93 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 SRPRAP08240 638 aaKnown RBP6.92□□□□□ -1.3
CDKL5-201ENST00000379989 ITGA5P08648 1049 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 IGFBP1P08833 259 aaPredicted RBP6.92□□□□□ -1.3
CDKL5-201ENST00000379989 MTNR1BP49286 362 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 DLX5P56178 289 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 SLC26A5P58743 744 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 GMFBP60983 142 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 CACNG1Q06432 222 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 TWF1Q12792 350 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 DMRTA1Q5VZB9 504 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 JMJD6Q6NYC1 403 aaPredicted RBP6.92□□□□□ -1.3
CDKL5-201ENST00000379989 DEGS2Q6QHC5 323 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 GDPD4Q6W3E5 623 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 SLC30A8Q8IWU4 369 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 FAM98AQ8NCA5 519 aaKnown RBP6.92□□□□□ -1.3
CDKL5-201ENST00000379989 SPPL2AQ8TCT8 520 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 DUSP19Q8WTR2 217 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 TM4SF18Q96CE8 201 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 MALSU1Q96EH3 234 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 PHYHIPLQ96FC7 376 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 NECAB3Q96P71 396 aaPredicted RBP6.92□□□□□ -1.3
CDKL5-201ENST00000379989 DEFB118Q96PH6 123 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 ATXN3LQ9H3M9 355 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 AUNIPQ9H7T9 357 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 TAS2R5Q9NYW4 299 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 TESQ9UGI8 421 aaKnown RBP6.92□□□□□ -1.3
CDKL5-201ENST00000379989 SLC22A14Q9Y267 594 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 FAM96BQ9Y3D0 163 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 ZFP37Q9Y6Q3 630 aaPredicted RBP6.92□□□□□ -1.3
CDKL5-201ENST00000379989 DSPPQ9NZW4 1301 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 OR14I1A6ND48 311 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 F5H5P2 479 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 FGF16O43320 207 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 CYTIPO60759 359 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 NFATC1O95644 943 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 IGSF6O95976 241 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 AK1P00568 194 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 F10P00742 488 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 THBS1P07996 1170 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 BCKDHAP12694 445 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 STAT5AP42229 794 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 PRKXP51817 358 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 SOX8P57073 446 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 KCNMB1Q16558 191 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 PSRC1Q6PGN9 363 aaPredicted RBP6.92□□□□□ -1.3
CDKL5-201ENST00000379989 FIGNL1Q6PIW4 674 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 RANBP3LQ86VV4 465 aaPredicted RBP6.92□□□□□ -1.3
CDKL5-201ENST00000379989 AQP11Q8NBQ7 271 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 MVB12AQ96EY5 273 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 CDKN2AIPNLQ96HQ2 116 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 ZNF382Q96SR6 550 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 MED17Q9NVC6 651 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 ASF1AQ9Y294 204 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 INSL6Q9Y581 213 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 OR51B4Q9Y5P0 310 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 SNX10Q9Y5X0 201 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 CCDC88CQ9P219 2028 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 PRAMEF25A6NGN4 478 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 ZNF726A6NNF4 738 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 J3KTA2 159 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 NARSO43776 548 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms