RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 CHRNA9Q9UGM1 479 aa13.74□□□□□ -0.21
SNX2-201ENST00000379516 SSR3Q9UNL2 185 aa13.74□□□□□ -0.21
SNX2-201ENST00000379516 J3QRE1 110 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 EIF4E2O60573 245 aaKnown RBP13.73□□□□□ -0.21
SNX2-201ENST00000379516 CPNE3O75131 537 aaKnown RBP13.73□□□□□ -0.21
SNX2-201ENST00000379516 SP9P0CG40 484 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 HIST1H1CP16403 213 aaKnown RBP13.73□□□□□ -0.21
SNX2-201ENST00000379516 IDUAP35475 653 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 TOMM34Q15785 309 aaPredicted RBP13.73□□□□□ -0.21
SNX2-201ENST00000379516 ZNF791Q3KP31 576 aaPredicted RBP13.73□□□□□ -0.21
SNX2-201ENST00000379516 TCEAL6Q6IPX3 200 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 CPEB2Q7Z5Q1 589 aaKnown RBP13.73□□□□□ -0.21
SNX2-201ENST00000379516 ZBTB44Q8NCP5 570 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 OR4K13Q8NH42 304 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 S100ZQ8WXG8 99 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 UFD1Q92890 307 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 TCEAL3Q969E4 200 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 KISS1RQ969F8 398 aaPredicted RBP13.73□□□□□ -0.21
SNX2-201ENST00000379516 TMEM203Q969S6 136 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 C8orf44Q96CB5 159 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 TRMT61AQ96FX7 289 aaKnown RBP13.73□□□□□ -0.21
SNX2-201ENST00000379516 LPAR4Q99677 370 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 ZNF649Q9BS31 505 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 WDR12Q9GZL7 423 aaKnown RBP13.73□□□□□ -0.21
SNX2-201ENST00000379516 C6orf62Q9GZU0 229 aaPredicted RBP13.73□□□□□ -0.21
SNX2-201ENST00000379516 ARRDC1-AS1Q9H2J1 176 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 MMP27Q9H306 513 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 FBXL4Q9UKA2 621 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 ADAM18Q9Y3Q7 739 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 NPFFR2Q9Y5X5 522 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 CCDC182A6NF36 153 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 OR6C70A6NIJ9 312 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 C12orf71A8MTZ7 269 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 BLOC1S5-TXNDC5H3BN57 136 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 GYPBP06028 91 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 EGR4Q05215 589 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 ZFP36L1Q07352 338 aaKnown RBP13.73□□□□□ -0.21
SNX2-201ENST00000379516 TRA2AQ13595 282 aaKnown RBP eCLIP13.73□□□□□ -0.21
SNX2-201ENST00000379516 ARMC4Q5T2S8 1044 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 POMZP3Q6PJE2 187 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 DPY19L2P2Q6ZN68 376 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 ACBD7Q8N6N7 88 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 ZFP41Q8N8Y5 198 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 ZNF485Q8NCK3 441 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 SDR9C7Q8NEX9 313 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 OR5W2Q8NH69 310 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 SPRYD4Q8WW59 207 aaPredicted RBP13.73□□□□□ -0.21
SNX2-201ENST00000379516 TBX5Q99593 518 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 WDR77Q9BQA1 342 aaPredicted RBP13.73□□□□□ -0.21
SNX2-201ENST00000379516 CDADC1Q9BWV3 514 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 JAM3Q9BX67 310 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 ASPNQ9BXN1 380 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 ADAM19Q9H013 955 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 RERGLQ9H628 205 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 TOR4AQ9NXH8 423 aa13.73□□□□□ -0.21
SNX2-201ENST00000379516 CCDC59Q9P031 241 aaKnown RBP13.73□□□□□ -0.21
SNX2-201ENST00000379516 WDR87Q6ZQQ6 2873 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 HEATR5AQ86XA9 2040 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 TRBV11-1A0A0K0K1C0 115 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 HTR3EA5X5Y0 456 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 FADS1O60427 444 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 LDOC1O95751 146 aaPredicted RBP13.72□□□□□ -0.21
SNX2-201ENST00000379516 IGF2P01344 180 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 MRPL3P09001 348 aaKnown RBP13.72□□□□□ -0.21
SNX2-201ENST00000379516 CCL4P13236 92 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 ZNF28P17035 718 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 PGCP20142 388 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 SOX6P35712 828 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 MPLP40238 635 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 PRPS1P60891 318 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 PSPHP78330 225 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 TMED1Q13445 227 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 TPBGQ13641 420 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 CBFBQ13951 182 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 ZNF74Q16587 644 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 TMEM99Q8N816 258 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 OR52N1Q8NH53 320 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 MOGAT1Q96PD6 335 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 SLC26A1Q9H2B4 701 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 C12orf10Q9HB07 376 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 NANSQ9NR45 359 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 KLHL21Q9UJP4 597 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 YARS2Q9Y2Z4 477 aaKnown RBP13.72□□□□□ -0.21
SNX2-201ENST00000379516 ASCC3Q8N3C0 2202 aaKnown RBP13.72□□□□□ -0.21
SNX2-201ENST00000379516 PLD2O14939 933 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 LRRTM2O43300 516 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 LALBAP00709 142 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 BMP4P12644 408 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 SLC2A5P22732 501 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 CXCR1P25024 350 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 RPS4XP62701 263 aaKnown RBP13.72□□□□□ -0.21
SNX2-201ENST00000379516 RPS25P62851 125 aaKnown RBP13.72□□□□□ -0.21
SNX2-201ENST00000379516 INAQ16352 499 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 MRPL14Q6P1L8 145 aaKnown RBP13.72□□□□□ -0.21
SNX2-201ENST00000379516 FAM199XQ6PEV8 388 aaPredicted RBP13.72□□□□□ -0.21
SNX2-201ENST00000379516 BTLAQ7Z6A9 289 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 BMPERQ8N8U9 685 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 OR10H4Q8NGA5 316 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 MOSPD2Q8NHP6 518 aa13.72□□□□□ -0.21
SNX2-201ENST00000379516 NUBPLQ8TB37 319 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms