RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 PAX1P15863 534 aa16.81■□□□□ 0.28
TMEM88B-201ENST00000378821 HOXB4P17483 251 aaPredicted RBP16.81■□□□□ 0.28
TMEM88B-201ENST00000378821 PGCP20142 388 aa16.81■□□□□ 0.28
TMEM88B-201ENST00000378821 ADSLP30566 484 aaPredicted RBP16.81■□□□□ 0.28
TMEM88B-201ENST00000378821 MAPRE2Q15555 327 aa16.81■□□□□ 0.28
TMEM88B-201ENST00000378821 TRMT5Q32P41 509 aaKnown RBP16.81■□□□□ 0.28
TMEM88B-201ENST00000378821 LIN52Q52LA3 116 aa16.81■□□□□ 0.28
TMEM88B-201ENST00000378821 PRAMEF8Q5VWM4 474 aa16.81■□□□□ 0.28
TMEM88B-201ENST00000378821 PRAMEF7Q5VXH5 474 aa16.81■□□□□ 0.28
TMEM88B-201ENST00000378821 NUFIP2Q7Z417 695 aaKnown RBP16.81■□□□□ 0.28
TMEM88B-201ENST00000378821 TUSC5Q8IXB3 177 aa16.81■□□□□ 0.28
TMEM88B-201ENST00000378821 BBS10Q8TAM1 723 aa16.81■□□□□ 0.28
TMEM88B-201ENST00000378821 ZC3HAV1LQ96H79 300 aaKnown RBP16.81■□□□□ 0.28
TMEM88B-201ENST00000378821 REXO5Q96IC2 774 aaKnown RBP16.81■□□□□ 0.28
TMEM88B-201ENST00000378821 BCL2L10Q9HD36 194 aa16.81■□□□□ 0.28
TMEM88B-201ENST00000378821 ZNF443Q9Y2A4 671 aaPredicted RBP16.81■□□□□ 0.28
TMEM88B-201ENST00000378821 FREM1Q5H8C1 2179 aa16.81■□□□□ 0.28
TMEM88B-201ENST00000378821 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 BBIP1A8MTZ0 92 aa16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 C5orf58C9J3I9 102 aa16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 FXYD1O00168 92 aa16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 AP3D1O14617 1153 aa16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 MRASO14807 208 aa16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 SLC22A2O15244 555 aa16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 ARHGEF9O43307 516 aa16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 ENPP1P22413 925 aa16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 RYKP34925 604 aa16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 NR1H2P55055 460 aa16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 SESN3P58005 492 aa16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 CDK6Q00534 326 aa16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 ADRM1Q16186 407 aa16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 COQ5Q5HYK3 327 aa16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 TMEM201Q5SNT2 666 aa16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 C3orf33Q6P1S2 294 aa16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 BIVMQ86UB2 503 aa16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 STEAP2Q8NFT2 490 aa16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 C18orf12Q96KH6 178 aa16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 ACTR6Q9GZN1 396 aa16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 NSRP1Q9H0G5 558 aaKnown RBP16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 GSX1Q9H4S2 264 aaPredicted RBP16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 TMEM38AQ9H6F2 299 aa16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 C12orf49Q9H741 205 aa16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 ACER3Q9NUN7 267 aa16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 RLIMQ9NVW2 624 aa16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 CHST2Q9Y4C5 530 aa16.8■□□□□ 0.28
TMEM88B-201ENST00000378821 LOC100653049A0A140TA62 436 aa16.79■□□□□ 0.28
TMEM88B-201ENST00000378821 CDHR4A6H8M9 788 aa16.79■□□□□ 0.28
TMEM88B-201ENST00000378821 GMNCA6NCL1 334 aa16.79■□□□□ 0.28
TMEM88B-201ENST00000378821 SMPD2O60906 423 aa16.79■□□□□ 0.28
TMEM88B-201ENST00000378821 KRT34O76011 436 aa16.79■□□□□ 0.28
TMEM88B-201ENST00000378821 PGM3O95394 542 aa16.79■□□□□ 0.28
TMEM88B-201ENST00000378821 THBS1P07996 1170 aa16.79■□□□□ 0.28
TMEM88B-201ENST00000378821 SCARB2Q14108 478 aa16.79■□□□□ 0.28
TMEM88B-201ENST00000378821 P2RY6Q15077 328 aa16.79■□□□□ 0.28
TMEM88B-201ENST00000378821 MMEL1Q495T6 779 aa16.79■□□□□ 0.28
TMEM88B-201ENST00000378821 SFRP5Q5T4F7 317 aa16.79■□□□□ 0.28
TMEM88B-201ENST00000378821 RNF220Q5VTB9 566 aa16.79■□□□□ 0.28
TMEM88B-201ENST00000378821 PTOV1Q86YD1 416 aa16.79■□□□□ 0.28
TMEM88B-201ENST00000378821 POU5F2Q8N7G0 328 aa16.79■□□□□ 0.28
TMEM88B-201ENST00000378821 TMEM234Q8WY98 164 aa16.79■□□□□ 0.28
TMEM88B-201ENST00000378821 USB1Q9BQ65 265 aaKnown RBP16.79■□□□□ 0.28
TMEM88B-201ENST00000378821 PSD2Q9BQI7 771 aa16.79■□□□□ 0.28
TMEM88B-201ENST00000378821 UBTD1Q9HAC8 227 aa16.79■□□□□ 0.28
TMEM88B-201ENST00000378821 PRR14LQ5THK1 2151 aa16.78■□□□□ 0.28
TMEM88B-201ENST00000378821 A0A1W2PNR3 127 aa16.78■□□□□ 0.28
TMEM88B-201ENST00000378821 ZNF814B7Z6K7 855 aa16.78■□□□□ 0.28
TMEM88B-201ENST00000378821 SNX3O60493 162 aa16.78■□□□□ 0.28
TMEM88B-201ENST00000378821 CYTIPO60759 359 aa16.78■□□□□ 0.28
TMEM88B-201ENST00000378821 CCDC22O60826 627 aa16.78■□□□□ 0.28
TMEM88B-201ENST00000378821 TMCC2O75069 709 aa16.78■□□□□ 0.28
TMEM88B-201ENST00000378821 MERTKQ12866 999 aa16.78■□□□□ 0.28
TMEM88B-201ENST00000378821 LARS2Q15031 903 aaKnown RBP16.78■□□□□ 0.28
TMEM88B-201ENST00000378821 CYP51A1Q16850 503 aa16.78■□□□□ 0.28
TMEM88B-201ENST00000378821 REEP3Q6NUK4 255 aa16.78■□□□□ 0.28
TMEM88B-201ENST00000378821 PLEKHM3Q6ZWE6 761 aa16.78■□□□□ 0.28
TMEM88B-201ENST00000378821 CPLX4Q7Z7G2 160 aa16.78■□□□□ 0.28
TMEM88B-201ENST00000378821 LSRQ86X29 649 aaPredicted RBP16.78■□□□□ 0.28
TMEM88B-201ENST00000378821 CLIP4Q8N3C7 705 aa16.78■□□□□ 0.28
TMEM88B-201ENST00000378821 ATP6V1C2Q8NEY4 427 aa16.78■□□□□ 0.28
TMEM88B-201ENST00000378821 ZNF563Q8TA94 476 aa16.78■□□□□ 0.28
TMEM88B-201ENST00000378821 LRRC58Q96CX6 371 aa16.78■□□□□ 0.28
TMEM88B-201ENST00000378821 CCL19Q99731 98 aa16.78■□□□□ 0.28
TMEM88B-201ENST00000378821 CCDC106Q9BWC9 280 aa16.78■□□□□ 0.28
TMEM88B-201ENST00000378821 RSPO3Q9BXY4 272 aaPredicted RBP16.78■□□□□ 0.28
TMEM88B-201ENST00000378821 GSX2Q9BZM3 304 aa16.78■□□□□ 0.28
TMEM88B-201ENST00000378821 KAT8Q9H7Z6 458 aaKnown RBP16.78■□□□□ 0.28
TMEM88B-201ENST00000378821 KLHL9Q9P2J3 617 aa16.78■□□□□ 0.28
TMEM88B-201ENST00000378821 ARID1AO14497 2285 aa16.78■□□□□ 0.28
TMEM88B-201ENST00000378821 ZNF724A8MTY0 619 aa16.77■□□□□ 0.28
TMEM88B-201ENST00000378821 SMAD9O15198 467 aaKnown RBP16.77■□□□□ 0.28
TMEM88B-201ENST00000378821 GKN3PP0CG01 181 aa16.77■□□□□ 0.28
TMEM88B-201ENST00000378821 ETS2P15036 469 aa16.77■□□□□ 0.28
TMEM88B-201ENST00000378821 SLC7A1P30825 629 aa16.77■□□□□ 0.28
TMEM88B-201ENST00000378821 APOBEC1P41238 236 aaKnown RBP16.77■□□□□ 0.28
TMEM88B-201ENST00000378821 OR3A2P47893 321 aa16.77■□□□□ 0.28
TMEM88B-201ENST00000378821 IDH2P48735 452 aaKnown RBP16.77■□□□□ 0.28
TMEM88B-201ENST00000378821 EPS8Q12929 822 aa16.77■□□□□ 0.28
TMEM88B-201ENST00000378821 CYLC2Q14093 348 aaPredicted RBP16.77■□□□□ 0.28
TMEM88B-201ENST00000378821 ZNF311Q5JNZ3 666 aa16.77■□□□□ 0.28
TMEM88B-201ENST00000378821 NANOGP8Q6NSW7 305 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms