RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 CXCL11O14625 94 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 ZNF264O43296 627 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 LYPLA1O75608 230 aaPredicted RBP1.47□□□□□ -2.17
VPS13A-206ENST00000376646 ATP5LO75964 103 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 IGHV3-23P01764 117 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 OPN1MWP04001 364 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 SEMG1P04279 462 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 OPN1MW2P0DN77 364 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 OPN1MW3P0DN78 364 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 DBTP11182 482 aaKnown RBP1.47□□□□□ -2.17
VPS13A-206ENST00000376646 POU2F1P14859 743 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 ZNF32P17041 273 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 PSMB1P20618 241 aaKnown RBP1.47□□□□□ -2.17
VPS13A-206ENST00000376646 YWHABP31946 246 aaKnown RBP1.47□□□□□ -2.17
VPS13A-206ENST00000376646 RPL13AP40429 203 aaKnown RBP1.47□□□□□ -2.17
VPS13A-206ENST00000376646 MAGEA8P43361 318 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 CCT3P49368 545 aaKnown RBP1.47□□□□□ -2.17
VPS13A-206ENST00000376646 EFNB2P52799 333 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 CHRNB3Q05901 458 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 CKAP4Q07065 602 aaKnown RBP1.47□□□□□ -2.17
VPS13A-206ENST00000376646 NCBP1Q09161 790 aaKnown RBP1.47□□□□□ -2.17
VPS13A-206ENST00000376646 CCDC173Q0VFZ6 552 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 SLC15A2Q16348 729 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 KYAT1Q16773 422 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 ISXQ2M1V0 245 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 SFT2D3Q587I9 215 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 UQCC3Q6UW78 93 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 TFAP2EQ6VUC0 442 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 ACOT7LQ6ZUV0 252 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 ARCQ7LC44 396 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 HSD17B13Q7Z5P4 300 aaPredicted RBP1.47□□□□□ -2.17
VPS13A-206ENST00000376646 SKA3Q8IX90 412 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 MRPS31Q92665 395 aaKnown RBP1.47□□□□□ -2.17
VPS13A-206ENST00000376646 MARC2Q969Z3 335 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 EFHD2Q96C19 240 aaPredicted RBP1.47□□□□□ -2.17
VPS13A-206ENST00000376646 TIMD4Q96H15 378 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 PGLYRP4Q96LB8 373 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 ZBTB18Q99592 522 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 KLHDC3Q9BQ90 382 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 CNPY3Q9BT09 278 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 GCOM2Q9BZD3 368 aaPredicted RBP1.47□□□□□ -2.17
VPS13A-206ENST00000376646 EHD1Q9H4M9 534 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 ISG20L2Q9H9L3 353 aaKnown RBP1.47□□□□□ -2.17
VPS13A-206ENST00000376646 NUDT15Q9NV35 164 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 ADAM28Q9UKQ2 775 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 ABCG2Q9UNQ0 655 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 TTC21BQ7Z4L5 1316 aa1.47□□□□□ -2.17
VPS13A-206ENST00000376646 ATP10AO60312 1499 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 IGHV7-81A0A0B4J1V7 117 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 A0A0G2JRQ6 117 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 A0A1B0GVL5 298 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 WI2-2373I1.2A0A1W2PRP0 233 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 EPOPA6NHQ4 379 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 IDSB3KWA1 339 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 F5H6K3 240 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 B4GALT2O60909 372 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 ECI2O75521 394 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 LYPD3O95274 346 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 AP2A1O95782 977 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 IGHG4P01861 327 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 LGALS2P05162 132 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 COX5AP20674 150 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 ANXA13P27216 316 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 GNA11P29992 359 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 RGRP47804 291 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 SLC26A2P50443 739 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 ATP1B3P54709 279 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 STX17P56962 302 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 KLRC3Q07444 240 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 EGFEM1PQ0D2K5 195 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 KLRB1Q12918 225 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 GRB7Q14451 532 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 DPYSL2Q16555 572 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 NSUN5P1Q3KNT7 163 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 GPRC6AQ5T6X5 926 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 FAM220AQ7Z4H9 259 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 TMEM179BQ7Z7N9 219 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 DHDDSQ86SQ9 333 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 LRRC75A-AS1Q8N1F1 130 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 ANKRD49Q8WVL7 239 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 HTR3CQ8WXA8 447 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 ST8SIA1Q92185 356 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 FGF11Q92914 225 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 ASB8Q9H765 288 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 FN3KRPQ9HA64 309 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 HOXC10Q9NYD6 342 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 COX16Q9P0S2 106 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 TMEM9Q9P0T7 183 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 STAP1Q9ULZ2 295 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 HPCAL4Q9UM19 191 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 TNRQ92752 1358 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 IGKV1D-8A0A087WSZ0 117 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 PCP4L1A6NKN8 68 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 FOXE1O00358 373 aaPredicted RBP1.46□□□□□ -2.18
VPS13A-206ENST00000376646 DCTN6O00399 190 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 NBR2O15453 112 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 MED7O43513 233 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 TIMM8AO60220 97 aaPredicted RBP1.46□□□□□ -2.18
VPS13A-206ENST00000376646 RAMP3O60896 148 aa1.46□□□□□ -2.18
VPS13A-206ENST00000376646 STAMBPO95630 424 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms