RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 ADAM29Q9UKF5 820 aa10.93□□□□□ -0.66
VPS13A-205ENST00000376636 RNF150Q9ULK6 438 aa10.93□□□□□ -0.66
VPS13A-205ENST00000376636 GPR25O00155 361 aa10.93□□□□□ -0.66
VPS13A-205ENST00000376636 NUDT21O43809 227 aaKnown RBP10.93□□□□□ -0.66
VPS13A-205ENST00000376636 USF1P22415 310 aaPredicted RBP10.93□□□□□ -0.66
VPS13A-205ENST00000376636 GABRA2P47869 451 aa10.93□□□□□ -0.66
VPS13A-205ENST00000376636 EMP2P54851 167 aa10.93□□□□□ -0.66
VPS13A-205ENST00000376636 KCNJ8Q15842 424 aa10.93□□□□□ -0.66
VPS13A-205ENST00000376636 CHRDL1Q9BU40 450 aa10.93□□□□□ -0.66
VPS13A-205ENST00000376636 NXF5Q9H1B4 397 aaKnown RBP10.93□□□□□ -0.66
VPS13A-205ENST00000376636 EMC7Q9NPA0 242 aa10.93□□□□□ -0.66
VPS13A-205ENST00000376636 ZDHHC7Q9NXF8 308 aa10.93□□□□□ -0.66
VPS13A-205ENST00000376636 URGCP-MRPS24S4R325 110 aa10.93□□□□□ -0.66
VPS13A-205ENST00000376636 RIMS1Q86UR5 1692 aaKnown RBP10.93□□□□□ -0.66
VPS13A-205ENST00000376636 IL1R2P27930 398 aa10.93□□□□□ -0.66
VPS13A-205ENST00000376636 MLLT11Q13015 90 aaPredicted RBP10.93□□□□□ -0.66
VPS13A-205ENST00000376636 SELPLGQ14242 412 aa10.93□□□□□ -0.66
VPS13A-205ENST00000376636 GAREM1Q9H706 876 aa10.93□□□□□ -0.66
VPS13A-205ENST00000376636 ARL2-SNX15V9GYD0 113 aa10.93□□□□□ -0.66
VPS13A-205ENST00000376636 SFTPDP35247 375 aa10.93□□□□□ -0.66
VPS13A-205ENST00000376636 CPOXP36551 454 aa10.93□□□□□ -0.66
VPS13A-205ENST00000376636 VIPR2P41587 438 aa10.93□□□□□ -0.66
VPS13A-205ENST00000376636 LCN6P62502 163 aa10.93□□□□□ -0.66
VPS13A-205ENST00000376636 GAB1Q13480 694 aa10.93□□□□□ -0.66
VPS13A-205ENST00000376636 SLC35F3Q8IY50 421 aa10.93□□□□□ -0.66
VPS13A-205ENST00000376636 OR11L1Q8NGX0 322 aa10.93□□□□□ -0.66
VPS13A-205ENST00000376636 SLC25A18Q9H1K4 315 aa10.93□□□□□ -0.66
VPS13A-205ENST00000376636 EGLN3Q9H6Z9 239 aa10.93□□□□□ -0.66
VPS13A-205ENST00000376636 RAB18Q9NP72 206 aa10.93□□□□□ -0.66
VPS13A-205ENST00000376636 RARRES3Q9UL19 164 aa10.93□□□□□ -0.66
VPS13A-205ENST00000376636 V9GYS6 101 aa10.93□□□□□ -0.66
VPS13A-205ENST00000376636 SLC16A6O15403 523 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 SMIM17P0DL12 118 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 TPMTP51580 245 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 SELENOWP63302 87 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 CPNE8Q86YQ8 564 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 SMIM12Q96EX1 92 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 FZD7O75084 574 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 HNRNPA2B1P22626 353 aaKnown RBP10.92□□□□□ -0.66
VPS13A-205ENST00000376636 SYPL2Q5VXT5 272 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 CPOQ8IVL8 374 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 CLEC1AQ8NC01 280 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 DPH1Q9BZG8 443 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 ZFP92A6NM28 416 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 SORDQ00796 357 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 OR7D2Q96RA2 312 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 SGPP1Q9BX95 441 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 TAF9BQ9HBM6 251 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 SUSD5O60279 629 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 CALCRP30988 508 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 RNF144AP50876 292 aaPredicted RBP10.92□□□□□ -0.66
VPS13A-205ENST00000376636 CACNG3O60359 315 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 RPL17P18621 184 aaKnown RBP10.92□□□□□ -0.66
VPS13A-205ENST00000376636 GPM6BQ13491 265 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 RGMBQ6NW40 437 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 SLC35G3Q8N808 338 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 OR2M7Q8NG81 312 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 OR5M8Q8NGP6 311 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 STT3BQ8TCJ2 826 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 RANBP9Q96S59 729 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 DPH7Q9BTV6 452 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 ALG12Q9BV10 488 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 KCNK12Q9HB15 430 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 LYRM2Q9NU23 88 aaPredicted RBP10.92□□□□□ -0.66
VPS13A-205ENST00000376636 PGAP2Q9UHJ9 254 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 OR2M5A3KFT3 312 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 RNASET2O00584 256 aaKnown RBP10.92□□□□□ -0.66
VPS13A-205ENST00000376636 BET1O15155 118 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 XRCC3O43542 346 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 OR5H8P0DN80 308 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 SLC7A9P82251 487 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 TESK1Q15569 626 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 SLC10A6Q3KNW5 377 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 OR6C68A6NDL8 312 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 TXNDC12O95881 172 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 CHRM4P08173 479 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 S100A11P31949 105 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 SLC51BQ86UW2 128 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 RAB3CQ96E17 227 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 ZNF728P0DKX0 622 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 AAK1Q2M2I8 961 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 TRNP1Q6NT89 227 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 OR6V1Q8N148 313 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 MARC2Q969Z3 335 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 ZMYND19Q96E35 227 aaPredicted RBP10.92□□□□□ -0.66
VPS13A-205ENST00000376636 SFXN2Q96NB2 322 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 PSAT1Q9Y617 370 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 KDM4FA0A1W2PPD8 638 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 LRRC30A6NM36 301 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 H3BML4 177 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 CBR1P16152 277 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 ACKR3P25106 362 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 SLC9A3R2Q15599 337 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 LTB4RQ15722 352 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 SERINC2Q96SA4 455 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 SUSD2Q9UGT4 822 aa10.92□□□□□ -0.66
VPS13A-205ENST00000376636 DDAH2O95865 285 aa10.91□□□□□ -0.66
VPS13A-205ENST00000376636 ENPP1P22413 925 aa10.91□□□□□ -0.66
VPS13A-205ENST00000376636 SPCS2Q15005 226 aa10.91□□□□□ -0.66
VPS13A-205ENST00000376636 RBPMSQ93062 196 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms