RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 BAXQ07812 192 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 TAAR2Q9P1P5 351 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 A0A1W2PQ09 198 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 AQP7O14520 342 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 SLC2A1P11166 492 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 TLE1Q04724 770 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 EMX1Q04741 257 aaPredicted RBP12.79□□□□□ -0.36
COL4A1-201ENST00000375820 ZNF750Q32MQ0 723 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 CDONQ4KMG0 1287 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 CPZQ66K79 652 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 FGF13Q92913 245 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 DVL3Q92997 716 aaPredicted RBP12.79□□□□□ -0.36
COL4A1-201ENST00000375820 OR6C1Q96RD1 312 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 SHPRHQ149N8 1683 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 LOC102725191A0A1B0GVB3 256 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 TXNDC12O95881 172 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 TGM6O95932 706 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 IGHG1P01857 330 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 IGFBP1P08833 259 aaPredicted RBP12.79□□□□□ -0.36
COL4A1-201ENST00000375820 ITGB7P26010 798 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 RGRP47804 291 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 OR8B8Q15620 311 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 PDLIM3Q53GG5 364 aaPredicted RBP12.79□□□□□ -0.36
COL4A1-201ENST00000375820 RBMXL1Q96E39 390 aaKnown RBP12.79□□□□□ -0.36
COL4A1-201ENST00000375820 ZMAT3Q9HA38 289 aaKnown RBP12.79□□□□□ -0.36
COL4A1-201ENST00000375820 GMPR2Q9P2T1 348 aaKnown RBP12.79□□□□□ -0.36
COL4A1-201ENST00000375820 SLC6A14Q9UN76 642 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 MEIOCA2RUB1 952 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 GABRPO00591 440 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 IGHV3-9P01782 118 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 RUNX2Q13950 521 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 BCL7AQ4VC05 210 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 RFLNAQ6ZTI6 216 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 OR4M1Q8NGD0 313 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 SGPP1Q9BX95 441 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 RANGRFQ9HD47 186 aaPredicted RBP12.79□□□□□ -0.36
COL4A1-201ENST00000375820 H7C1Q1 480 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 EFSO43281 561 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 CHRNB4P30926 498 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 VEGFBP49765 207 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 KEAP1Q14145 624 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 PARP16Q8N5Y8 322 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 ZNF439Q8NDP4 499 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 DTD2Q96FN9 168 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 ZNF587Q96SQ5 575 aaPredicted RBP12.79□□□□□ -0.36
COL4A1-201ENST00000375820 SLA2Q9H6Q3 261 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 ZNF334Q9HCZ1 680 aaPredicted RBP12.79□□□□□ -0.36
COL4A1-201ENST00000375820 LTN1O94822 1766 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 CRYZL1O95825 349 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 MAGEB1P43366 347 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 MTCP1P56278 107 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 AKR1C1Q04828 323 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 PM20D1Q6GTS8 502 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 METAP1DQ6UB28 335 aaPredicted RBP12.79□□□□□ -0.36
COL4A1-201ENST00000375820 GOLM1Q8NBJ4 401 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 TMEM163Q8TC26 289 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 STT3BQ8TCJ2 826 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 SLC46A2Q9BY10 475 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 NAA50Q9GZZ1 169 aaKnown RBP12.79□□□□□ -0.36
COL4A1-201ENST00000375820 SDR39U1Q9NRG7 319 aaPredicted RBP12.79□□□□□ -0.36
COL4A1-201ENST00000375820 IL17CQ9P0M4 197 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 PGAP2Q9UHJ9 254 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 DUSP13Q9UII6 198 aa12.79□□□□□ -0.36
COL4A1-201ENST00000375820 GASTP01350 101 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 CALCBP10092 127 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 HBA1P69905 142 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 ZC3H3Q8IXZ2 948 aaKnown RBP12.78□□□□□ -0.36
COL4A1-201ENST00000375820 SUMF1Q8NBK3 374 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 SCCPDHQ8NBX0 429 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 PRRT1Q99946 306 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 PRR14Q9BWN1 585 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 ANKRD60Q9BZ19 345 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 SLAMF7Q9NQ25 335 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 OSGIN1Q9UJX0 560 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 SLC35A3Q9Y2D2 325 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 DRD1P21728 446 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 NME2P22392 152 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 CSNK1EP49674 416 aaKnown RBP12.78□□□□□ -0.36
COL4A1-201ENST00000375820 BTN1A1Q13410 526 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 OGFOD3Q6PK18 319 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 ZNF546Q86UE3 836 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 ZNF480Q8WV37 535 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 GGHQ92820 318 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 NECTIN4Q96NY8 510 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 SORCS2Q96PQ0 1159 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 AIFM1O95831 613 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 PMP2P02689 132 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 ATP1B3P54709 279 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 TESK1Q15569 626 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 DPPA4Q7L190 304 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 MMP21Q8N119 569 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 ARPC4-TTLL3A0A0A6YYG9 625 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 SCRG1O75711 98 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 SERPINF1P36955 418 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 HES1Q14469 280 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 PGGHGQ32M88 737 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 KHDC1LQ5JSQ8 128 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 UBE2NLQ5JXB2 153 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 MRI1Q9BV20 369 aa12.78□□□□□ -0.36
COL4A1-201ENST00000375820 HHLA2Q9UM44 414 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms