RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 RNF4P78317 190 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 ARHGAP19Q14CB8 494 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 C18orf63Q68DL7 685 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 FAM111BQ6SJ93 734 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 SIRT6Q8N6T7 355 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 PAPD5Q8NDF8 572 aaKnown RBP13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 BHLHE23Q8NDY6 225 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 TANKQ92844 425 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 TAAR8Q969N4 342 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 ARSGQ96EG1 525 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 HRASLSQ9HDD0 168 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 LRRTM2O43300 516 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 SCAF4O95104 1147 aaKnown RBP13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 CLDN6P56747 220 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 ZNF322Q6U7Q0 402 aaPredicted RBP13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 OR1J4Q8NGS1 313 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 COQ10AQ96MF6 247 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 TMEM9BQ9NQ34 198 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 GFOD1Q9NXC2 390 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 NWD2Q9ULI1 1742 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 TRBV4-1A0A0J9YWV2 114 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 GMDSO60547 372 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 GPR18Q14330 331 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 LKAAEAR1Q8TD35 194 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 RNASET2O00584 256 aaKnown RBP13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 AIFM1O95831 613 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 C21orf33P30042 268 aaPredicted RBP13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 OR1D5P58170 312 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 RAB5BP61020 215 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 C15orf39Q6ZRI6 1047 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 SLC16A14Q7RTX9 510 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 ACOT13Q9NPJ3 140 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 ATPIF1Q9UII2 106 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 TRAPPC2LQ9UL33 140 aa13.73□□□□□ -0.21
NOTCH4-201ENST00000375023 ARFGEF2Q9Y6D5 1785 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 SH2D7A6NKC9 451 aaPredicted RBP13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 ZNF705GA8MUZ8 300 aaPredicted RBP13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 ITGB2P05107 769 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 OR8G3PP0DMU2 310 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 IL2RGP31785 369 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 TAS2R20P59543 309 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 IKZF1Q13422 519 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 TNK1Q13470 666 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 MS4A15Q8N5U1 240 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 SLC6A5Q9Y345 797 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 ACOD1A6NK06 481 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 LY86O95711 162 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 SLC6A8P48029 635 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 HBA1P69905 142 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 RPE65Q16518 533 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 TPRA1Q86W33 373 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 SULF2Q8IWU5 870 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 SLC39A11Q8N1S5 342 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 DNAJC5GQ8N7S2 189 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 FRMD1Q8N878 549 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 PHRF1Q9P1Y6 1649 aaKnown RBP13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 A6NIZ1 184 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 B4DXG7 233 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 AKAIN1P0CW23 69 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 EFNA3P52797 238 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 RAP1BP61224 184 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 RAP1AP62834 184 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 ZC3H3Q8IXZ2 948 aaKnown RBP13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 PSMF1Q92530 271 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 MYADMQ96S97 322 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 PBX4Q9BYU1 374 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 ATG12O94817 140 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 MAOAP21397 527 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 TSFMP43897 325 aaKnown RBP13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 ZNF300Q96RE9 604 aaPredicted RBP13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 OR2B2Q9GZK3 357 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 ZNF593O00488 134 aaPredicted RBP13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 PRKYO43930 277 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 OR7C1O76099 320 aaPredicted RBP13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 SNRNP70P08621 437 aaKnown RBP13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 HOXA1P49639 335 aaPredicted RBP13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 RAB31Q13636 194 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 GFRALQ6UXV0 394 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 ARFGAP1Q8N6T3 406 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 MRPL43Q8N983 215 aaKnown RBP13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 ZNF578Q96N58 590 aaPredicted RBP13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 FIZ1Q96SL8 496 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 ZMAT3Q9HA38 289 aaKnown RBP13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 FAM96BQ9Y3D0 163 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 RFC3P40938 356 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 RRADP55042 308 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 SHEQ5VZ18 495 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 MMP21Q8N119 569 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 C12orf45Q8N5I9 185 aaPredicted RBP13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 SIMC1Q8NDZ2 872 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 FNDC9Q8TBE3 224 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 ZFP90Q8TF47 636 aa13.72□□□□□ -0.21
NOTCH4-201ENST00000375023 GPX3P22352 226 aa13.71□□□□□ -0.21
NOTCH4-201ENST00000375023 PROZP22891 400 aa13.71□□□□□ -0.21
NOTCH4-201ENST00000375023 KCNAB1Q14722 419 aa13.71□□□□□ -0.21
NOTCH4-201ENST00000375023 OR14A2Q96R54 314 aa13.71□□□□□ -0.21
NOTCH4-201ENST00000375023 CDCA3Q99618 268 aaPredicted RBP13.71□□□□□ -0.21
NOTCH4-201ENST00000375023 NOSIPQ9Y314 301 aaKnown RBP13.71□□□□□ -0.21
NOTCH4-201ENST00000375023 TSPAN11A1L157 253 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms