RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 IL7P13232 177 aa16.8■□□□□ 0.28
RXRB-202ENST00000374685 FOLR1P15328 257 aa16.8■□□□□ 0.28
RXRB-202ENST00000374685 HTR1FP30939 366 aa16.8■□□□□ 0.28
RXRB-202ENST00000374685 ZP2Q05996 745 aa16.8■□□□□ 0.28
RXRB-202ENST00000374685 KLHL36Q8N4N3 616 aa16.8■□□□□ 0.28
RXRB-202ENST00000374685 FAM98AQ8NCA5 519 aaKnown RBP16.8■□□□□ 0.28
RXRB-202ENST00000374685 PTP4A1Q93096 173 aa16.8■□□□□ 0.28
RXRB-202ENST00000374685 OMA1Q96E52 524 aa16.8■□□□□ 0.28
RXRB-202ENST00000374685 ADOQ96SZ5 270 aa16.8■□□□□ 0.28
RXRB-202ENST00000374685 LMF2Q9BU23 707 aaKnown RBP16.8■□□□□ 0.28
RXRB-202ENST00000374685 ABCB9Q9NP78 766 aa16.8■□□□□ 0.28
RXRB-202ENST00000374685 BCAT2O15382 392 aaPredicted RBP16.79■□□□□ 0.28
RXRB-202ENST00000374685 CHP2O43745 196 aa16.79■□□□□ 0.28
RXRB-202ENST00000374685 ZNF780AO75290 641 aaPredicted RBP16.79■□□□□ 0.28
RXRB-202ENST00000374685 GABRA4P48169 554 aa16.79■□□□□ 0.28
RXRB-202ENST00000374685 CFHR1Q03591 330 aa16.79■□□□□ 0.28
RXRB-202ENST00000374685 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.79■□□□□ 0.28
RXRB-202ENST00000374685 DSG2Q14126 1118 aa16.79■□□□□ 0.28
RXRB-202ENST00000374685 TAB1Q15750 504 aa16.79■□□□□ 0.28
RXRB-202ENST00000374685 PRPF38BQ5VTL8 546 aaKnown RBP16.79■□□□□ 0.28
RXRB-202ENST00000374685 NIPAL3Q6P499 406 aa16.79■□□□□ 0.28
RXRB-202ENST00000374685 CBLN3Q6UW01 205 aa16.79■□□□□ 0.28
RXRB-202ENST00000374685 ZNF517Q6ZMY9 492 aaPredicted RBP16.79■□□□□ 0.28
RXRB-202ENST00000374685 OR52E2Q8NGJ4 325 aa16.79■□□□□ 0.28
RXRB-202ENST00000374685 KLHDC3Q9BQ90 382 aa16.79■□□□□ 0.28
RXRB-202ENST00000374685 SLC30A2Q9BRI3 323 aa16.79■□□□□ 0.28
RXRB-202ENST00000374685 NXF5Q9H1B4 397 aaKnown RBP16.79■□□□□ 0.28
RXRB-202ENST00000374685 TIGARQ9NQ88 270 aa16.79■□□□□ 0.28
RXRB-202ENST00000374685 KLHL1Q9NR64 748 aa16.79■□□□□ 0.28
RXRB-202ENST00000374685 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.79■□□□□ 0.28
RXRB-202ENST00000374685 ATXN7L1Q9ULK2 861 aaPredicted RBP16.79■□□□□ 0.28
RXRB-202ENST00000374685 DAPL1A0PJW8 107 aa16.79■□□□□ 0.28
RXRB-202ENST00000374685 RIIAD1A6NNX1 92 aa16.79■□□□□ 0.28
RXRB-202ENST00000374685 OIP5O43482 229 aa16.79■□□□□ 0.28
RXRB-202ENST00000374685 ATP12AP54707 1039 aa16.79■□□□□ 0.28
RXRB-202ENST00000374685 FAM122CQ6P4D5 195 aa16.79■□□□□ 0.28
RXRB-202ENST00000374685 SLC25A45Q8N413 288 aa16.79■□□□□ 0.28
RXRB-202ENST00000374685 SNAPC3Q92966 411 aa16.79■□□□□ 0.28
RXRB-202ENST00000374685 KCTD7Q96MP8 289 aa16.79■□□□□ 0.28
RXRB-202ENST00000374685 DPYSL5Q9BPU6 564 aa16.79■□□□□ 0.28
RXRB-202ENST00000374685 NUDT22Q9BRQ3 303 aa16.79■□□□□ 0.28
RXRB-202ENST00000374685 ARHGAP9Q9BRR9 750 aa16.79■□□□□ 0.28
RXRB-202ENST00000374685 COMMD3Q9UBI1 195 aa16.79■□□□□ 0.28
RXRB-202ENST00000374685 TMEM129A0AVI4 362 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 FAM171A2A8MVW0 826 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 KHNYNO15037 678 aaKnown RBP16.78■□□□□ 0.28
RXRB-202ENST00000374685 CD226Q15762 336 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 ZNF613Q6PF04 617 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 RPTNQ6XPR3 784 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 KCTD20Q7Z5Y7 419 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 MARCH9Q86YJ5 346 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 RAB43Q86YS6 212 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 LIX1LQ8IVB5 337 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 GPR135Q8IZ08 494 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 UBE2J2Q8N2K1 259 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 OR1L3Q8NH93 324 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 BRIX1Q8TDN6 353 aaKnown RBP16.78■□□□□ 0.28
RXRB-202ENST00000374685 ZMYND19Q96E35 227 aaPredicted RBP16.78■□□□□ 0.28
RXRB-202ENST00000374685 MESP1Q9BRJ9 268 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 ALG8Q9BVK2 526 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 POLHQ9Y253 713 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 NAA10P41227 235 aaPredicted RBP16.78■□□□□ 0.28
RXRB-202ENST00000374685 TCTE1Q5JU00 501 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 GARNL3Q5VVW2 1013 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 RNF113BQ8IZP6 322 aaKnown RBP16.78■□□□□ 0.28
RXRB-202ENST00000374685 ATP6V1C2Q8NEY4 427 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 SETD6Q8TBK2 473 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 CCDC32Q9BV29 185 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 CCDC86Q9H6F5 360 aaKnown RBP16.78■□□□□ 0.28
RXRB-202ENST00000374685 TMEM131Q92545 1883 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 CACNA1EQ15878 2313 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 IGHV1OR21-1A0A087WYE8 117 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 CPED1A4D0V7 1026 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 SERINC4A6NH21 518 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 C4orf47A7E2U8 309 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 HCN1O60741 890 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 CSF2RBP32927 897 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 NSDHLQ15738 373 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 PLK5Q496M5 336 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 ARL9Q6T311 187 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 TMPRSS11AQ6ZMR5 421 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 MEPCEQ7L2J0 689 aaKnown RBP16.78■□□□□ 0.28
RXRB-202ENST00000374685 DTX3Q8N9I9 347 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 OR5M3Q8NGP4 307 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 ZFAND1Q8TCF1 268 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 PTPMT1Q8WUK0 201 aaPredicted RBP16.78■□□□□ 0.28
RXRB-202ENST00000374685 G6PC3Q9BUM1 346 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 TRIM2Q9C040 744 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 IER3IP1Q9Y5U9 82 aa16.78■□□□□ 0.28
RXRB-202ENST00000374685 IGHV3-20A0A0C4DH32 117 aa16.77■□□□□ 0.28
RXRB-202ENST00000374685 BLOC1S5-TXNDC5H3BN57 136 aa16.77■□□□□ 0.28
RXRB-202ENST00000374685 J3QLW9 94 aa16.77■□□□□ 0.28
RXRB-202ENST00000374685 GTPBP1O00178 669 aaKnown RBP16.77■□□□□ 0.28
RXRB-202ENST00000374685 ZNF749O43361 778 aa16.77■□□□□ 0.28
RXRB-202ENST00000374685 ZNF19P17023 458 aa16.77■□□□□ 0.28
RXRB-202ENST00000374685 RPS5P46782 204 aaKnown RBP16.77■□□□□ 0.28
RXRB-202ENST00000374685 HSD17B7P56937 341 aa16.77■□□□□ 0.28
RXRB-202ENST00000374685 LNX2Q8N448 690 aa16.77■□□□□ 0.28
RXRB-202ENST00000374685 RFLNBQ8N5W9 214 aa16.77■□□□□ 0.28
RXRB-202ENST00000374685 ACBD7Q8N6N7 88 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms