RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 NARSO43776 548 aaKnown RBP12.64□□□□□ -0.39
USP49-201ENST00000373006 ATG12O94817 140 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 TGM6O95932 706 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 NMBP08949 121 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 OR1Q1Q15612 314 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 METTL11BQ5VVY1 283 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 RGS7BPQ6MZT1 257 aaPredicted RBP12.64□□□□□ -0.39
USP49-201ENST00000373006 SEZ6L2Q6UXD5 910 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 LILRB2Q8N423 598 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 NXPE3Q969Y0 559 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 SEMA4CQ9C0C4 833 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 SHARPINQ9H0F6 387 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 IFT22Q9H7X7 185 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 POT1Q9NUX5 634 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 ZNF223Q9UK11 482 aaPredicted RBP12.64□□□□□ -0.39
USP49-201ENST00000373006 EDARQ9UNE0 448 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 TRBV2A0A0J9YWF9 115 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 SLC22A23A1A5C7 686 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 ACOD1A6NK06 481 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 FAM74A7A6NL05 159 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 PEX12O00623 359 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 RPN2P04844 631 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 ATP1B1P05026 303 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 NT5EP21589 574 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 MAT2AP31153 395 aaKnown RBP12.64□□□□□ -0.39
USP49-201ENST00000373006 DCTDP32321 178 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 UBE2MP61081 183 aaKnown RBP12.64□□□□□ -0.39
USP49-201ENST00000373006 BTN3A2P78410 334 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 MELKQ14680 651 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 COL19A1Q14993 1142 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 MLF2Q15773 248 aaPredicted RBP12.64□□□□□ -0.39
USP49-201ENST00000373006 DUSP5Q16690 384 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 LINC00303Q3SY05 128 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 FAM74A3Q4VXF1 159 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 FAM209BQ5JX69 171 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 ASPGQ86U10 573 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 SFTPA1Q8IWL2 248 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 PELI1Q96FA3 418 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 ZNF681Q96N22 645 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 DMRTA2Q96SC8 542 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 INSM2Q96T92 566 aaPredicted RBP12.64□□□□□ -0.39
USP49-201ENST00000373006 CACYBPQ9HB71 228 aaKnown RBP12.64□□□□□ -0.39
USP49-201ENST00000373006 GNG8Q9UK08 70 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 ZNF175Q9Y473 711 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 OR1A2Q9Y585 309 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 LRRK1Q38SD2 2015 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 SCN2AQ99250 2005 aa12.64□□□□□ -0.39
USP49-201ENST00000373006 TRAPPC13A5PLN9 417 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 ANKRD61A6NGH8 418 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 OR52A4PA6NMU1 304 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 MCRIP1C9JLW8 97 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 FMO6PO60774 539 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 AKR1C2P52895 323 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 ID2Q02363 134 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 AKR1C1Q04828 323 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 MRM1Q6IN84 353 aaKnown RBP12.63□□□□□ -0.39
USP49-201ENST00000373006 FAM98AQ8NCA5 519 aaKnown RBP12.63□□□□□ -0.39
USP49-201ENST00000373006 MOAP1Q96BY2 351 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 OR1F2PQ96R84 312 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 TNFRSF13CQ96RJ3 184 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 MRPS30Q9NP92 439 aaKnown RBP12.63□□□□□ -0.39
USP49-201ENST00000373006 NOX4Q9NPH5 578 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 NTMQ9P121 344 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 APOBEC3BQ9UH17 382 aaKnown RBP12.63□□□□□ -0.39
USP49-201ENST00000373006 SIGLEC7Q9Y286 467 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 TRAV1-2A0A0B4J238 106 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 IDSB3KWA1 339 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 PDCD5O14737 125 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 GSTZ1O43708 216 aaPredicted RBP12.63□□□□□ -0.39
USP49-201ENST00000373006 ARL6IP5O75915 188 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 FGF18O76093 207 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 PRNPP04156 253 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 ASGR2P07307 311 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 CBR1P16152 277 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 CD53P19397 219 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 RPS11P62280 158 aaKnown RBP eCLIP12.63□□□□□ -0.39
USP49-201ENST00000373006 RPS15P62841 145 aaKnown RBP12.63□□□□□ -0.39
USP49-201ENST00000373006 KRT33BQ14525 404 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 AKIRIN2Q53H80 203 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 MFSD12Q6NUT3 480 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 RANBP3LQ86VV4 465 aaPredicted RBP12.63□□□□□ -0.39
USP49-201ENST00000373006 SHISA5Q8N114 240 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 KCT2Q8NC54 265 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 FKRPQ9H9S5 495 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 CAPN10Q9HC96 672 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 INPP5EQ9NRR6 644 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 SLC35A3Q9Y2D2 325 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.63□□□□□ -0.39
USP49-201ENST00000373006 A0A087WV48 116 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 ANXA2P2A6NMY6 339 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 PRRT4C9JH25 899 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 RCBTB2O95199 551 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 FNDC3BQ53EP0 1204 aaKnown RBP12.63□□□□□ -0.39
USP49-201ENST00000373006 TMEM35AQ53FP2 167 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 UBE2NLQ5JXB2 153 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 MRPL2Q5T653 305 aaKnown RBP12.63□□□□□ -0.39
USP49-201ENST00000373006 FAM199XQ6PEV8 388 aaPredicted RBP12.63□□□□□ -0.39
USP49-201ENST00000373006 CDK20Q8IZL9 346 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 SDR9C7Q8NEX9 313 aa12.63□□□□□ -0.39
USP49-201ENST00000373006 OR2L5Q8NG80 312 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms