RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 OR10A4Q9H209 315 aa16.82■□□□□ 0.28
CKS1B-203ENST00000368439 TMEM38AQ9H6F2 299 aa16.82■□□□□ 0.28
CKS1B-203ENST00000368439 CCM2LQ9NUG4 571 aaPredicted RBP16.82■□□□□ 0.28
CKS1B-203ENST00000368439 ZNF226Q9NYT6 803 aa16.82■□□□□ 0.28
CKS1B-203ENST00000368439 TMEM181Q9P2C4 612 aa16.82■□□□□ 0.28
CKS1B-203ENST00000368439 ZNF232Q9UNY5 417 aa16.82■□□□□ 0.28
CKS1B-203ENST00000368439 PRRC2AP48634 2157 aaKnown RBP16.82■□□□□ 0.28
CKS1B-203ENST00000368439 TEP1Q99973 2627 aaKnown RBP16.82■□□□□ 0.28
CKS1B-203ENST00000368439 RAMP1O60894 148 aa16.81■□□□□ 0.28
CKS1B-203ENST00000368439 UQCRBP14927 111 aa16.81■□□□□ 0.28
CKS1B-203ENST00000368439 PPP3CBP16298 524 aa16.81■□□□□ 0.28
CKS1B-203ENST00000368439 OR3A2P47893 321 aa16.81■□□□□ 0.28
CKS1B-203ENST00000368439 CDK6Q00534 326 aa16.81■□□□□ 0.28
CKS1B-203ENST00000368439 FBXW10Q5XX13 1052 aa16.81■□□□□ 0.28
CKS1B-203ENST00000368439 COMTD1Q86VU5 262 aa16.81■□□□□ 0.28
CKS1B-203ENST00000368439 CXorf67Q86X51 503 aaPredicted RBP16.81■□□□□ 0.28
CKS1B-203ENST00000368439 SLC35B4Q969S0 331 aa16.81■□□□□ 0.28
CKS1B-203ENST00000368439 ZNF775Q96BV0 537 aaPredicted RBP16.81■□□□□ 0.28
CKS1B-203ENST00000368439 DDIT4LQ96D03 193 aa16.81■□□□□ 0.28
CKS1B-203ENST00000368439 ZC3HAV1LQ96H79 300 aaKnown RBP16.81■□□□□ 0.28
CKS1B-203ENST00000368439 FGFR1OP2Q9NVK5 253 aa16.81■□□□□ 0.28
CKS1B-203ENST00000368439 PLEKHA6Q9Y2H5 1048 aa16.81■□□□□ 0.28
CKS1B-203ENST00000368439 GPR52Q9Y2T5 361 aa16.81■□□□□ 0.28
CKS1B-203ENST00000368439 NDUFAF1Q9Y375 327 aa16.81■□□□□ 0.28
CKS1B-203ENST00000368439 ZNF469Q96JG9 3925 aaPredicted RBP16.8■□□□□ 0.28
CKS1B-203ENST00000368439 C5orf58C9J3I9 102 aa16.8■□□□□ 0.28
CKS1B-203ENST00000368439 FRS3O43559 492 aa16.8■□□□□ 0.28
CKS1B-203ENST00000368439 PRKAR1BP31321 381 aa16.8■□□□□ 0.28
CKS1B-203ENST00000368439 NTF4P34130 210 aa16.8■□□□□ 0.28
CKS1B-203ENST00000368439 SLC16A1P53985 500 aa16.8■□□□□ 0.28
CKS1B-203ENST00000368439 SELPLGQ14242 412 aa16.8■□□□□ 0.28
CKS1B-203ENST00000368439 WBP2NLQ6ICG8 309 aa16.8■□□□□ 0.28
CKS1B-203ENST00000368439 REEP3Q6NUK4 255 aa16.8■□□□□ 0.28
CKS1B-203ENST00000368439 DHDDSQ86SQ9 333 aa16.8■□□□□ 0.28
CKS1B-203ENST00000368439 PTOV1Q86YD1 416 aa16.8■□□□□ 0.28
CKS1B-203ENST00000368439 CCDC103Q8IW40 242 aa16.8■□□□□ 0.28
CKS1B-203ENST00000368439 C3orf49Q96BT1 292 aa16.8■□□□□ 0.28
CKS1B-203ENST00000368439 ANKRD27Q96NW4 1050 aa16.8■□□□□ 0.28
CKS1B-203ENST00000368439 POTEKPQ9BYX7 375 aa16.8■□□□□ 0.28
CKS1B-203ENST00000368439 ACTR6Q9GZN1 396 aa16.8■□□□□ 0.28
CKS1B-203ENST00000368439 CXXC4Q9H2H0 198 aa16.8■□□□□ 0.28
CKS1B-203ENST00000368439 CCDC134Q9H6E4 229 aa16.8■□□□□ 0.28
CKS1B-203ENST00000368439 FANCFQ9NPI8 374 aa16.8■□□□□ 0.28
CKS1B-203ENST00000368439 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.8■□□□□ 0.28
CKS1B-203ENST00000368439 PRSS50Q9UI38 385 aa16.8■□□□□ 0.28
CKS1B-203ENST00000368439 CORO2BQ9UQ03 480 aa16.8■□□□□ 0.28
CKS1B-203ENST00000368439 EVPLLA8MZ36 301 aa16.79■□□□□ 0.28
CKS1B-203ENST00000368439 FBP2O00757 339 aa16.79■□□□□ 0.28
CKS1B-203ENST00000368439 KLF4O43474 513 aa16.79■□□□□ 0.28
CKS1B-203ENST00000368439 TPST1O60507 370 aa16.79■□□□□ 0.28
CKS1B-203ENST00000368439 ATE1O95260 518 aa16.79■□□□□ 0.28
CKS1B-203ENST00000368439 ART1P52961 327 aa16.79■□□□□ 0.28
CKS1B-203ENST00000368439 OR2B6P58173 313 aa16.79■□□□□ 0.28
CKS1B-203ENST00000368439 HOXC5Q00444 222 aa16.79■□□□□ 0.28
CKS1B-203ENST00000368439 GUCY1A3Q02108 690 aa16.79■□□□□ 0.28
CKS1B-203ENST00000368439 SCARB2Q14108 478 aa16.79■□□□□ 0.28
CKS1B-203ENST00000368439 TSC22D1Q15714 1073 aa16.79■□□□□ 0.28
CKS1B-203ENST00000368439 SFRP5Q5T4F7 317 aa16.79■□□□□ 0.28
CKS1B-203ENST00000368439 DHRS4L2Q6PKH6 230 aa16.79■□□□□ 0.28
CKS1B-203ENST00000368439 CADM2Q8N3J6 435 aa16.79■□□□□ 0.28
CKS1B-203ENST00000368439 ZHX1-C8orf76Q96EF9 292 aa16.79■□□□□ 0.28
CKS1B-203ENST00000368439 PIK3IP1Q96FE7 263 aa16.79■□□□□ 0.28
CKS1B-203ENST00000368439 HS3ST6Q96QI5 342 aa16.79■□□□□ 0.28
CKS1B-203ENST00000368439 CGREF1Q99674 301 aa16.79■□□□□ 0.28
CKS1B-203ENST00000368439 FOXC2Q99958 501 aa16.79■□□□□ 0.28
CKS1B-203ENST00000368439 ARMC7Q9H6L4 198 aa16.79■□□□□ 0.28
CKS1B-203ENST00000368439 MED13LQ71F56 2210 aa16.78■□□□□ 0.28
CKS1B-203ENST00000368439 VPS13CQ709C8 3753 aa16.78■□□□□ 0.28
CKS1B-203ENST00000368439 TMEM229AB2RXF0 380 aa16.78■□□□□ 0.28
CKS1B-203ENST00000368439 ANGPT2O15123 496 aa16.78■□□□□ 0.28
CKS1B-203ENST00000368439 NPIPB7O75200 414 aa16.78■□□□□ 0.28
CKS1B-203ENST00000368439 ADAP00813 363 aa16.78■□□□□ 0.28
CKS1B-203ENST00000368439 FPR1P21462 350 aa16.78■□□□□ 0.28
CKS1B-203ENST00000368439 CXCR1P25024 350 aa16.78■□□□□ 0.28
CKS1B-203ENST00000368439 COPZ1P61923 177 aa16.78■□□□□ 0.28
CKS1B-203ENST00000368439 SLC35A1P78382 337 aa16.78■□□□□ 0.28
CKS1B-203ENST00000368439 BNIP2Q12982 314 aa16.78■□□□□ 0.28
CKS1B-203ENST00000368439 GLIPR1L2Q4G1C9 344 aa16.78■□□□□ 0.28
CKS1B-203ENST00000368439 Q6ZT83 130 aa16.78■□□□□ 0.28
CKS1B-203ENST00000368439 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.78■□□□□ 0.28
CKS1B-203ENST00000368439 GALNT5Q7Z7M9 940 aa16.78■□□□□ 0.28
CKS1B-203ENST00000368439 ATG4DQ86TL0 474 aaPredicted RBP16.78■□□□□ 0.28
CKS1B-203ENST00000368439 PIGXQ8TBF5 258 aa16.78■□□□□ 0.28
CKS1B-203ENST00000368439 S100PBPQ96BU1 408 aa16.78■□□□□ 0.28
CKS1B-203ENST00000368439 MBD6Q96DN6 1003 aa16.78■□□□□ 0.28
CKS1B-203ENST00000368439 HDHD5Q9BXW7 423 aa16.78■□□□□ 0.28
CKS1B-203ENST00000368439 ITPR3Q14573 2671 aa16.78■□□□□ 0.28
CKS1B-203ENST00000368439 LIPT2A6NK58 231 aa16.77■□□□□ 0.28
CKS1B-203ENST00000368439 RAF1P04049 648 aa16.77■□□□□ 0.28
CKS1B-203ENST00000368439 TROVE2P10155 538 aaKnown RBP eCLIP16.77■□□□□ 0.28
CKS1B-203ENST00000368439 DNASE1P24855 282 aa16.77■□□□□ 0.28
CKS1B-203ENST00000368439 ARFIP2P53365 341 aa16.77■□□□□ 0.28
CKS1B-203ENST00000368439 PCBP3P57721 371 aaKnown RBP16.77■□□□□ 0.28
CKS1B-203ENST00000368439 MTPNP58546 118 aa16.77■□□□□ 0.28
CKS1B-203ENST00000368439 P2RY6Q15077 328 aa16.77■□□□□ 0.28
CKS1B-203ENST00000368439 NET1Q7Z628 596 aaPredicted RBP16.77■□□□□ 0.28
CKS1B-203ENST00000368439 STEAP2Q8NFT2 490 aa16.77■□□□□ 0.28
CKS1B-203ENST00000368439 CACYBPQ9HB71 228 aaKnown RBP16.77■□□□□ 0.28
CKS1B-203ENST00000368439 MED4Q9NPJ6 270 aa16.77■□□□□ 0.28
CKS1B-203ENST00000368439 EMC3Q9P0I2 261 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms