RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 FN3KQ9H479 309 aa13.64□□□□□ -0.23
NEK2-201ENST00000366998 GALNT9Q9HCQ5 603 aa13.64□□□□□ -0.23
NEK2-201ENST00000366998 CHCHD3Q9NX63 227 aaKnown RBP13.64□□□□□ -0.23
NEK2-201ENST00000366998 TAS2R10Q9NYW0 307 aa13.64□□□□□ -0.23
NEK2-201ENST00000366998 NCDNQ9UBB6 729 aa13.64□□□□□ -0.23
NEK2-201ENST00000366998 OSGIN1Q9UJX0 560 aa13.64□□□□□ -0.23
NEK2-201ENST00000366998 CCDC187A0A096LP49 1063 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 HTR3EA5X5Y0 456 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 MCIDASD6RGH6 385 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 PRR23D1E9PI22 279 aaPredicted RBP13.63□□□□□ -0.23
NEK2-201ENST00000366998 PLD2O14939 933 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 SLC25A12O75746 678 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 CD63P08962 238 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 PRR23D2P0DMB1 279 aaPredicted RBP13.63□□□□□ -0.23
NEK2-201ENST00000366998 ZNF3P17036 446 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 TCN2P20062 427 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 HTR1FP30939 366 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 RPS18P62269 152 aaKnown RBP13.63□□□□□ -0.23
NEK2-201ENST00000366998 C17orf67Q0P5P2 114 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 AQP6Q13520 282 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 ZNF74Q16587 644 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 CTF1Q16619 201 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 BICRALQ6AI39 1079 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 PAQR6Q6TCH4 344 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 TIPARPQ7Z3E1 657 aaKnown RBP13.63□□□□□ -0.23
NEK2-201ENST00000366998 GPR119Q8TDV5 335 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 CT55Q8WUE5 264 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 TTC9Q92623 222 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 RASL10BQ96S79 203 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 FGF20Q9NP95 211 aaPredicted RBP13.63□□□□□ -0.23
NEK2-201ENST00000366998 NANSQ9NR45 359 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 MRPS18AQ9NVS2 196 aaKnown RBP13.63□□□□□ -0.23
NEK2-201ENST00000366998 NSG1A0A0A6YYJ2 146 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 DLGAP3O95886 979 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 BCL10O95999 233 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 IFNGP01579 166 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 IGHEP01854 428 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 PEPDP12955 493 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 OTX2P32243 289 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 ATP6V1E1P36543 226 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 POLR2HP52434 150 aaKnown RBP13.63□□□□□ -0.23
NEK2-201ENST00000366998 GAS1P54826 345 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 EGR4Q05215 589 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 SPCS2Q15005 226 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 KLHL12Q53G59 568 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 NIPAL3Q6P499 406 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 OR11G2Q8NGC1 345 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 OR10G3Q8NGC4 313 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 KTI12Q96EK9 354 aaPredicted RBP13.63□□□□□ -0.23
NEK2-201ENST00000366998 IMMP1LQ96LU5 166 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 MOGAT1Q96PD6 335 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 MGLLQ99685 303 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 BCL7BQ9BQE9 202 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 METTL7AQ9H8H3 244 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 IER3IP1Q9Y5U9 82 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 CPAMD8Q8IZJ3 1885 aa13.63□□□□□ -0.23
NEK2-201ENST00000366998 SDK2Q58EX2 2172 aa13.62□□□□□ -0.23
NEK2-201ENST00000366998 TRIM64BA6NI03 449 aa13.62□□□□□ -0.23
NEK2-201ENST00000366998 PRR33A8MZF0 331 aa13.62□□□□□ -0.23
NEK2-201ENST00000366998 C9orf172C9J069 976 aa13.62□□□□□ -0.23
NEK2-201ENST00000366998 BLOC1S5-TXNDC5H3BN57 136 aa13.62□□□□□ -0.23
NEK2-201ENST00000366998 ADAM10O14672 748 aa13.62□□□□□ -0.23
NEK2-201ENST00000366998 IGF2P01344 180 aa13.62□□□□□ -0.23
NEK2-201ENST00000366998 FBXO45P0C2W1 286 aa13.62□□□□□ -0.23
NEK2-201ENST00000366998 ZNF182P17025 639 aaPredicted RBP13.62□□□□□ -0.23
NEK2-201ENST00000366998 RPS5P46782 204 aaKnown RBP13.62□□□□□ -0.23
NEK2-201ENST00000366998 ETV1P50549 477 aa13.62□□□□□ -0.23
NEK2-201ENST00000366998 RPS7P62081 194 aaKnown RBP13.62□□□□□ -0.23
NEK2-201ENST00000366998 C1DQ13901 141 aaKnown RBP13.62□□□□□ -0.23
NEK2-201ENST00000366998 CRMP1Q14194 572 aa13.62□□□□□ -0.23
NEK2-201ENST00000366998 CSRP2Q16527 193 aa13.62□□□□□ -0.23
NEK2-201ENST00000366998 TSTQ16762 297 aaKnown RBP13.62□□□□□ -0.23
NEK2-201ENST00000366998 C3orf38Q5JPI3 329 aa13.62□□□□□ -0.23
NEK2-201ENST00000366998 HES3Q5TGS1 186 aa13.62□□□□□ -0.23
NEK2-201ENST00000366998 RNLSQ5VYX0 342 aa13.62□□□□□ -0.23
NEK2-201ENST00000366998 LYPD8Q6UX82 237 aa13.62□□□□□ -0.23
NEK2-201ENST00000366998 NANOGP1Q8N7R0 232 aa13.62□□□□□ -0.23
NEK2-201ENST00000366998 CYB561A3Q8NBI2 242 aa13.62□□□□□ -0.23
NEK2-201ENST00000366998 FAM98AQ8NCA5 519 aaKnown RBP13.62□□□□□ -0.23
NEK2-201ENST00000366998 OR4F15Q8NGB8 312 aa13.62□□□□□ -0.23
NEK2-201ENST00000366998 M1APQ8TC57 530 aa13.62□□□□□ -0.23
NEK2-201ENST00000366998 RPL3LQ92901 407 aaKnown RBP13.62□□□□□ -0.23
NEK2-201ENST00000366998 SPACA9Q96E40 222 aaPredicted RBP13.62□□□□□ -0.23
NEK2-201ENST00000366998 DNAJA3Q96EY1 480 aa13.62□□□□□ -0.23
NEK2-201ENST00000366998 HCAR1Q9BXC0 346 aa13.62□□□□□ -0.23
NEK2-201ENST00000366998 ZNF160Q9HCG1 818 aa13.62□□□□□ -0.23
NEK2-201ENST00000366998 MMP25Q9NPA2 562 aa13.62□□□□□ -0.23
NEK2-201ENST00000366998 PARD6AQ9NPB6 346 aa13.62□□□□□ -0.23
NEK2-201ENST00000366998 TOR4AQ9NXH8 423 aa13.62□□□□□ -0.23
NEK2-201ENST00000366998 TCFL5Q9UL49 500 aa13.62□□□□□ -0.23
NEK2-201ENST00000366998 LSM2Q9Y333 95 aaKnown RBP13.62□□□□□ -0.23
NEK2-201ENST00000366998 EXOSC1Q9Y3B2 195 aaKnown RBP13.62□□□□□ -0.23
NEK2-201ENST00000366998 PCDHGA1Q9Y5H4 931 aa13.62□□□□□ -0.23
NEK2-201ENST00000366998 TMED7-TICAM2A0A0A6YYA0 188 aa13.61□□□□□ -0.23
NEK2-201ENST00000366998 ZC3H12DA2A288 527 aaKnown RBP13.61□□□□□ -0.23
NEK2-201ENST00000366998 ANKUB1A6NFN9 424 aa13.61□□□□□ -0.23
NEK2-201ENST00000366998 SLC22A1O15245 554 aa13.61□□□□□ -0.23
NEK2-201ENST00000366998 SUSD5O60279 629 aa13.61□□□□□ -0.23
NEK2-201ENST00000366998 ITGA10O75578 1167 aa13.61□□□□□ -0.23
NEK2-201ENST00000366998 PAICSP22234 425 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms