RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 HSPB2A8KAH6 182 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 GIPP09681 153 aaPredicted RBP10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 HSPB2Q16082 182 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 PFDN5Q99471 154 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 NAA11Q9BSU3 229 aaPredicted RBP10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 CUEDC1Q9NWM3 386 aaPredicted RBP10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 ICKQ9UPZ9 632 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 FAM221BA6H8Z2 402 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 IFNA2P01563 188 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 HMGN2P46Q86SG4 172 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 SHDQ96IW2 340 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 IKZF5Q9H5V7 419 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 TMEM30AQ9NV96 361 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 VNN3Q9NY84 501 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 RAF1P04049 648 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 NEURL2Q9BR09 285 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 BIN3Q9NQY0 253 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 TAAR2Q9P1P5 351 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 USP36Q9P275 1121 aaKnown RBP10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 PI4KAP42356 2102 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 COL4A1P02462 1669 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 A8MUA0 341 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 FBLP22087 321 aaKnown RBP10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 RGS19P49795 217 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 ETV1P50549 477 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 LYPD4Q6UWN0 246 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 OR6T1Q8NGN1 323 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 FAM174AQ8TBP5 190 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 SLC46A2Q9BY10 475 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 UBQLN4Q9NRR5 601 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 ZNF701Q9NV72 531 aaPredicted RBP10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 TSPAN15O95858 294 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 KLK3P07288 261 aaPredicted RBP10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 CBLP22681 906 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 CBFBQ13951 182 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 TMEM225Q6GV28 225 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 ZNF709Q8N972 641 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 SLC22A8Q8TCC7 542 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 TCTEX1D2Q8WW35 142 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 TM4SF18Q96CE8 201 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 NECTIN4Q96NY8 510 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 TMEM82A0PJX8 343 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 ATG12O94817 140 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 GAAP10253 952 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 RAB3AP20336 220 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 LRFN4Q6PJG9 635 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 SIAH3Q8IW03 269 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 CMTM3Q96MX0 182 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 SORBS1Q9BX66 1292 aaKnown RBP10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 SYNPO2LQ9H987 977 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 DUSP22Q9NRW4 184 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 PPP4R1LQ9P1A2 415 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 SYT7O43581 403 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 GRPRP30550 384 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 S100A11P31949 105 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 IDO2Q6ZQW0 420 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 LYRM4Q9HD34 91 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 BRCA1P38398 1863 aaKnown RBP10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 SGK494L7N484 410 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 ICMTO60725 284 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 SLC48A1Q6P1K1 146 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 CLEC2DQ9UHP7 191 aa10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.99□□□□□ -0.65
CDC42BPA-202ENST00000366764 SNRNP200O75643 2136 aaKnown RBP10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 GGT3PA6NGU5 568 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 IFNA5P01569 189 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 RUNX3Q13761 415 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 CD300LGQ6UXG3 332 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 FNDC9Q8TBE3 224 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 NELFAQ9H3P2 528 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 BRWD3Q6RI45 1802 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 SDC3O75056 442 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 GPX5O75715 221 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 M6PRP20645 277 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 EVX1P49640 407 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 GDF7Q7Z4P5 450 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 TMEM185AQ8NFB2 350 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 PGAM5Q96HS1 289 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 INIPQ9NRY2 104 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 ASF1BQ9NVP2 202 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 TAS2R16Q9NYV7 291 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 B4DXG7 233 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 NPIPA2E9PIF3 369 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 NPIPA3F8WFD2 350 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 KHNYNO15037 678 aaKnown RBP10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 PMS2P2O95744 297 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 PDGFAP04085 211 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 FAM180BQ6P0A1 224 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 SSX6Q7RTT6 188 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 PTOV1Q86YD1 416 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 PLXDC1Q8IUK5 500 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 ZNF334Q9HCZ1 680 aaPredicted RBP10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 TMEFF2Q9UIK5 374 aaPredicted RBP10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 FAM230AA0A1W2PPH8 454 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 AKR1C4P17516 323 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 TGM1P22735 817 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 TRIM23P36406 574 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 PTPRRQ15256 657 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 MFSD4AQ8N468 514 aa10.98□□□□□ -0.65
CDC42BPA-202ENST00000366764 OR51L1Q8NGJ5 315 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms