RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 ISYNA1Q9NPH2 558 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 DUX4Q9UBX2 424 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 TRAV18A0A075B6X5 111 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 A0A0A6YYD5 115 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 C11orf98E9PRG8 122 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 SYT5O00445 386 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 PDCD5O14737 125 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 HIST1H2ABP04908 130 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 DBIP07108 87 aaKnown RBP6.08□□□□□ -1.44
CSDE1-203ENST00000358528 GRK6P43250 576 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 ACTC1P68032 377 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 ACTA1P68133 377 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 IRF4Q15306 451 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 TAF13Q15543 124 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 SFRP5Q5T4F7 317 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 METTL11BQ5VVY1 283 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 LIN54Q6MZP7 749 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 LRRN1Q6UXK5 716 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 IDO2Q6ZQW0 420 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 BTN2A1Q7KYR7 527 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 HIST3H2AQ7L7L0 130 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 SSX6Q7RTT6 188 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 CHST4Q8NCG5 386 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 OR2T4Q8NH00 348 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 APOBEC4Q8WW27 367 aaKnown RBP6.08□□□□□ -1.44
CSDE1-203ENST00000358528 NR4A3Q92570 626 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 NSMAFQ92636 917 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 HIST1H2ACQ93077 130 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 SLC25A36Q96CQ1 311 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 KCTD12Q96CX2 325 aaKnown RBP6.08□□□□□ -1.44
CSDE1-203ENST00000358528 SDF2Q99470 211 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 ULBP3Q9BZM4 244 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 TMEM185BQ9H7F4 350 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 LIN7BQ9HAP6 207 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 CLDND1Q9NY35 253 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 NDOR1Q9UHB4 597 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 SIGLEC5O15389 551 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 AGR2O95994 175 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 ANKRD34CP0C6C1 535 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 PRKACAP17612 351 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 PRKAR1BP31321 381 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 ART1P52961 327 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 NRG3P56975 720 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 SIGLEC14Q08ET2 396 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 ERV3-1Q14264 604 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 KCNAB1Q14722 419 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 PDGFRLQ15198 375 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 TRAM1Q15629 374 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 PLA1AQ53H76 456 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 EOGTQ5NDL2 527 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 NHLRC1Q6VVB1 395 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 Q6ZTK2 550 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 TPRA1Q86W33 373 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 PAQR7Q86WK9 346 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 ZNF619Q8N2I2 560 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 RELL2Q8NC24 303 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-203ENST00000358528 SFXN5Q8TD22 340 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 CASTOR1Q8WTX7 329 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 YIPF5Q969M3 257 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 RASD2Q96D21 266 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 RAB11FIP5Q9BXF6 653 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 B3GNT4Q9C0J1 378 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 MCOLN1Q9GZU1 580 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 ZMAT3Q9HA38 289 aaKnown RBP6.08□□□□□ -1.44
CSDE1-203ENST00000358528 DLL4Q9NR61 685 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 MED17Q9NVC6 651 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 TAS2R3Q9NYW6 316 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 ACAD8Q9UKU7 415 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 ZNF346Q9UL40 294 aaKnown RBP6.08□□□□□ -1.44
CSDE1-203ENST00000358528 PLEKHA6Q9Y2H5 1048 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 TMEM72A0PK05 275 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 OR2W5A6NFC9 320 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 KHNYNO15037 678 aaKnown RBP6.07□□□□□ -1.44
CSDE1-203ENST00000358528 TBX6O95947 436 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-203ENST00000358528 EPXP11678 715 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 ZNF35P13682 527 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 NAT1P18440 290 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 TM4SF4P48230 202 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 C19orf57Q0VDD7 668 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 ENPP2Q13822 863 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 ARHGAP11AQ6P4F7 1023 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 BRIX1Q8TDN6 353 aaKnown RBP6.07□□□□□ -1.44
CSDE1-203ENST00000358528 PTP4A1Q93096 173 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 ZC3HAV1LQ96H79 300 aaKnown RBP6.07□□□□□ -1.44
CSDE1-203ENST00000358528 ZNF471Q9BX82 626 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-203ENST00000358528 SLC6A20Q9NP91 592 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 PRDM7Q9NQW5 492 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 SDHAF2Q9NX18 166 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 LYARQ9NX58 379 aaKnown RBP6.07□□□□□ -1.44
CSDE1-203ENST00000358528 ADAM29Q9UKF5 820 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 PLXNA3P51805 1871 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 PLXNA4Q9HCM2 1894 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 A0A1B0GWA3 101 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 C4orf51C9J302 202 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 PRICKLE3O43900 615 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-203ENST00000358528 PAPLNO95428 1278 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 PLGP00747 810 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-203ENST00000358528 CSTAP01040 98 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 ATP1B1P05026 303 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 F13BP05160 661 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms