RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 MEAF6Q9HAF1 191 aa9.41□□□□□ -0.9
CAPN3-204ENST00000356316 CACYBPQ9HB71 228 aaKnown RBP9.41□□□□□ -0.9
CAPN3-204ENST00000356316 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.41□□□□□ -0.9
CAPN3-204ENST00000356316 TMED7Q9Y3B3 224 aa9.41□□□□□ -0.9
CAPN3-204ENST00000356316 V9GYY5 206 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-204ENST00000356316 CFAP73A6NFT4 308 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 TRPC5OSA6NMA1 111 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 HMGN4O00479 90 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 ZNF208O43345 1280 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 SSX4O60224 188 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 ANP32DO95626 131 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 KRT75O95678 551 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 PGRP06401 933 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 DBIP07108 87 aaKnown RBP9.4□□□□□ -0.9
CAPN3-204ENST00000356316 DHRS4L1P0CG22 281 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 BMP4P12644 408 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 CXCR1P25024 350 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 ACVR1BP36896 505 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 SLC1A3P43003 542 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 ZNF83P51522 516 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 UFM1P61960 85 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 TGFBR3Q03167 851 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 DMTNQ08495 405 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 SYPL1Q16563 259 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 NRF1Q16656 503 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 PGGHGQ32M88 737 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 ABLIM2Q6H8Q1 611 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 LRRC74BQ6ZQY2 392 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 ATG4DQ86TL0 474 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-204ENST00000356316 CCDC103Q8IW40 242 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 PEX5LQ8IYB4 626 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 FBXL14Q8N1E6 418 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 WDR60Q8WVS4 1066 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 CNOT9Q92600 299 aaKnown RBP9.4□□□□□ -0.9
CAPN3-204ENST00000356316 ARL5BQ96KC2 179 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 SORT1Q99523 831 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 RHNO1Q9BSD3 238 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 PARD6BQ9BYG5 372 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 GRIP2Q9C0E4 1043 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 OR11A1Q9GZK7 315 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 SLCO5A1Q9H2Y9 848 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 TAS2R16Q9NYV7 291 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 SLC9A8Q9Y2E8 581 aa9.4□□□□□ -0.9
CAPN3-204ENST00000356316 ABCA2Q9BZC7 2435 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 FAM234BA2RU67 622 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 TMEM247A6NEH6 219 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 AGAP5A6NIR3 686 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 CLDN24A6NM45 220 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 ZNF716A6NP11 495 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 SHISA9B4DS77 424 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 SLCO1B7G3V0H7 640 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 M0R1B8 84 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 RFXANKO14593 260 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 AP3D1O14617 1153 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 KRT33AO76009 404 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 IL6P05231 212 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 GSNP06396 782 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 EDNRAP25101 427 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 TACR3P29371 465 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 TTKP33981 857 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 FABP6P51161 128 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 SLC16A1P53985 500 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 COPZ1P61923 177 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 GUCA2AQ02747 115 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 BST1Q10588 318 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 RAB35Q15286 201 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 GSTA3Q16772 222 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 NXNQ6DKJ4 435 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 TMEM225Q6GV28 225 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 OGFOD2Q6N063 350 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 CASP12Q6UXS9 341 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 PRIMA1Q86XR5 153 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 ZNF440Q8IYI8 595 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 ANKFN1Q8N957 763 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 ANKRD42Q8N9B4 389 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 GLB1L3Q8NCI6 653 aaPredicted RBP9.39□□□□□ -0.91
CAPN3-204ENST00000356316 MAPK1IP1LQ8NDC0 245 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 MUS81Q96NY9 551 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 DHRS9Q9BPW9 319 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 INPP5KQ9BT40 448 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 TRAF4Q9BUZ4 470 aaPredicted RBP9.39□□□□□ -0.91
CAPN3-204ENST00000356316 ARMC7Q9H6L4 198 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 FKRPQ9H9S5 495 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 AIG1Q9NVV5 245 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 THAP1Q9NVV9 213 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 CALML5Q9NZT1 146 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 HAO1Q9UJM8 370 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 PRDM4Q9UKN5 801 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 ZNF232Q9UNY5 417 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 ROS1P08922 2347 aa9.39□□□□□ -0.91
CAPN3-204ENST00000356316 USF3Q68DE3 2245 aa9.38□□□□□ -0.91
CAPN3-204ENST00000356316 GOLGA8QA0A0J9YX86 632 aa9.38□□□□□ -0.91
CAPN3-204ENST00000356316 A0A1W2PR80 420 aa9.38□□□□□ -0.91
CAPN3-204ENST00000356316 PRAMEF27A3QJZ7 478 aa9.38□□□□□ -0.91
CAPN3-204ENST00000356316 GOLGA8OA6NCC3 632 aa9.38□□□□□ -0.91
CAPN3-204ENST00000356316 GOLGA8NF8WBI6 632 aa9.38□□□□□ -0.91
CAPN3-204ENST00000356316 HDAC3O15379 428 aa9.38□□□□□ -0.91
CAPN3-204ENST00000356316 TLX2O43763 284 aaPredicted RBP9.38□□□□□ -0.91
CAPN3-204ENST00000356316 ADAM11O75078 769 aa9.38□□□□□ -0.91
CAPN3-204ENST00000356316 BCAS1O75363 584 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms