RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 NEDD8Q15843 81 aa18.64■□□□□ 0.58
TRIM4-202ENST00000354241 DCAF10Q5QP82 559 aa18.64■□□□□ 0.58
TRIM4-202ENST00000354241 TMEM201Q5SNT2 666 aa18.64■□□□□ 0.58
TRIM4-202ENST00000354241 IGF2-ASQ6U949 168 aa18.64■□□□□ 0.58
TRIM4-202ENST00000354241 TMEM163Q8TC26 289 aa18.64■□□□□ 0.58
TRIM4-202ENST00000354241 PAQR8Q8TEZ7 354 aa18.64■□□□□ 0.58
TRIM4-202ENST00000354241 CCNB1IP1Q9NPC3 277 aa18.64■□□□□ 0.58
TRIM4-202ENST00000354241 TMEM72A0PK05 275 aa18.64■□□□□ 0.57
TRIM4-202ENST00000354241 HTR3EA5X5Y0 456 aa18.64■□□□□ 0.57
TRIM4-202ENST00000354241 CLCA1A8K7I4 914 aa18.64■□□□□ 0.57
TRIM4-202ENST00000354241 BHLHE40O14503 412 aa18.64■□□□□ 0.57
TRIM4-202ENST00000354241 SURF4O15260 269 aa18.64■□□□□ 0.57
TRIM4-202ENST00000354241 RGS10O43665 173 aa18.64■□□□□ 0.57
TRIM4-202ENST00000354241 IGF2P01344 180 aa18.64■□□□□ 0.57
TRIM4-202ENST00000354241 HMGN1P05114 100 aa18.64■□□□□ 0.57
TRIM4-202ENST00000354241 HTR3AP46098 478 aa18.64■□□□□ 0.57
TRIM4-202ENST00000354241 RPS5P46782 204 aaKnown RBP18.64■□□□□ 0.57
TRIM4-202ENST00000354241 ALDH3B2P48448 385 aa18.64■□□□□ 0.57
TRIM4-202ENST00000354241 FHL1Q13642 323 aa18.64■□□□□ 0.57
TRIM4-202ENST00000354241 ZNF74Q16587 644 aa18.64■□□□□ 0.57
TRIM4-202ENST00000354241 SLC22A10Q63ZE4 541 aa18.64■□□□□ 0.57
TRIM4-202ENST00000354241 TMEM81Q6P7N7 255 aa18.64■□□□□ 0.57
TRIM4-202ENST00000354241 ADGRG3Q86Y34 549 aa18.64■□□□□ 0.57
TRIM4-202ENST00000354241 CYP4Z2PQ8N1L4 340 aa18.64■□□□□ 0.57
TRIM4-202ENST00000354241 FAM26EQ8N5C1 309 aa18.64■□□□□ 0.57
TRIM4-202ENST00000354241 OR2M3Q8NG83 312 aa18.64■□□□□ 0.57
TRIM4-202ENST00000354241 OR4K17Q8NGC6 315 aa18.64■□□□□ 0.57
TRIM4-202ENST00000354241 PSMF1Q92530 271 aa18.64■□□□□ 0.57
TRIM4-202ENST00000354241 GGHQ92820 318 aa18.64■□□□□ 0.57
TRIM4-202ENST00000354241 LRR1Q96L50 414 aa18.64■□□□□ 0.57
TRIM4-202ENST00000354241 COPS4Q9BT78 406 aa18.64■□□□□ 0.57
TRIM4-202ENST00000354241 VCX3AQ9NNX9 186 aa18.64■□□□□ 0.57
TRIM4-202ENST00000354241 MED17Q9NVC6 651 aa18.64■□□□□ 0.57
TRIM4-202ENST00000354241 GPR83Q9NYM4 423 aa18.64■□□□□ 0.57
TRIM4-202ENST00000354241 DMXL1Q9Y485 3027 aa18.64■□□□□ 0.57
TRIM4-202ENST00000354241 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.63■□□□□ 0.57
TRIM4-202ENST00000354241 ITGA3P26006 1051 aa18.63■□□□□ 0.57
TRIM4-202ENST00000354241 SLC6A6P31641 620 aa18.63■□□□□ 0.57
TRIM4-202ENST00000354241 EFNB1P98172 346 aa18.63■□□□□ 0.57
TRIM4-202ENST00000354241 OCLNQ16625 522 aa18.63■□□□□ 0.57
TRIM4-202ENST00000354241 GXYLT1Q4G148 440 aa18.63■□□□□ 0.57
TRIM4-202ENST00000354241 JMJD6Q6NYC1 403 aaPredicted RBP18.63■□□□□ 0.57
TRIM4-202ENST00000354241 RTL4Q6ZR62 310 aa18.63■□□□□ 0.57
TRIM4-202ENST00000354241 VASH2Q86V25 355 aa18.63■□□□□ 0.57
TRIM4-202ENST00000354241 BEST3Q8N1M1 668 aa18.63■□□□□ 0.57
TRIM4-202ENST00000354241 TAAR8Q969N4 342 aa18.63■□□□□ 0.57
TRIM4-202ENST00000354241 DNAJA3Q96EY1 480 aa18.63■□□□□ 0.57
TRIM4-202ENST00000354241 MOGAT1Q96PD6 335 aa18.63■□□□□ 0.57
TRIM4-202ENST00000354241 NPAS1Q99742 590 aa18.63■□□□□ 0.57
TRIM4-202ENST00000354241 NANSQ9NR45 359 aa18.63■□□□□ 0.57
TRIM4-202ENST00000354241 RYDENQ9NUL5 291 aaKnown RBP18.63■□□□□ 0.57
TRIM4-202ENST00000354241 FBXL2Q9UKC9 423 aa18.63■□□□□ 0.57
TRIM4-202ENST00000354241 NDUFB2O95178 105 aa18.62■□□□□ 0.57
TRIM4-202ENST00000354241 SLC2A10O95528 541 aa18.62■□□□□ 0.57
TRIM4-202ENST00000354241 PPP1R3DO95685 299 aa18.62■□□□□ 0.57
TRIM4-202ENST00000354241 MT-ND2P03891 347 aa18.62■□□□□ 0.57
TRIM4-202ENST00000354241 GRK5P34947 590 aa18.62■□□□□ 0.57
TRIM4-202ENST00000354241 FOXF1Q12946 379 aa18.62■□□□□ 0.57
TRIM4-202ENST00000354241 SLC35F1Q5T1Q4 408 aa18.62■□□□□ 0.57
TRIM4-202ENST00000354241 WDSUB1Q8N9V3 476 aa18.62■□□□□ 0.57
TRIM4-202ENST00000354241 TMIGD2Q96BF3 282 aa18.62■□□□□ 0.57
TRIM4-202ENST00000354241 ANGPTL4Q9BY76 406 aa18.62■□□□□ 0.57
TRIM4-202ENST00000354241 SH2D2AQ9NP31 389 aa18.62■□□□□ 0.57
TRIM4-202ENST00000354241 PCDHGB6Q9Y5F9 930 aa18.62■□□□□ 0.57
TRIM4-202ENST00000354241 GVINP1Q7Z2Y8 2422 aa18.62■□□□□ 0.57
TRIM4-202ENST00000354241 ZC3H12DA2A288 527 aaKnown RBP18.62■□□□□ 0.57
TRIM4-202ENST00000354241 G3V3Y1 287 aa18.62■□□□□ 0.57
TRIM4-202ENST00000354241 TCEA1P23193 301 aaKnown RBP18.62■□□□□ 0.57
TRIM4-202ENST00000354241 LTBQ06643 244 aa18.62■□□□□ 0.57
TRIM4-202ENST00000354241 AIMP2Q13155 320 aaKnown RBP18.62■□□□□ 0.57
TRIM4-202ENST00000354241 SYT14P1Q58G82 188 aa18.62■□□□□ 0.57
TRIM4-202ENST00000354241 ATP1A1-AS1Q5TC04 95 aa18.62■□□□□ 0.57
TRIM4-202ENST00000354241 MEDAGQ5VYS4 303 aa18.62■□□□□ 0.57
TRIM4-202ENST00000354241 MDGA2Q7Z553 956 aa18.62■□□□□ 0.57
TRIM4-202ENST00000354241 IGFN1Q86VF2 1251 aa18.62■□□□□ 0.57
TRIM4-202ENST00000354241 LNX2Q8N448 690 aa18.62■□□□□ 0.57
TRIM4-202ENST00000354241 MYDGFQ969H8 173 aa18.62■□□□□ 0.57
TRIM4-202ENST00000354241 RELTQ969Z4 430 aa18.62■□□□□ 0.57
TRIM4-202ENST00000354241 SGCZQ96LD1 299 aa18.62■□□□□ 0.57
TRIM4-202ENST00000354241 FER1L6-AS2Q96M78 137 aa18.62■□□□□ 0.57
TRIM4-202ENST00000354241 FRMD6Q96NE9 622 aa18.62■□□□□ 0.57
TRIM4-202ENST00000354241 ZNF582Q96NG8 517 aaPredicted RBP18.62■□□□□ 0.57
TRIM4-202ENST00000354241 TRAV36DV7A0A075B6V5 113 aa18.61■□□□□ 0.57
TRIM4-202ENST00000354241 A8MVM7 634 aa18.61■□□□□ 0.57
TRIM4-202ENST00000354241 SHISA8B8ZZ34 492 aa18.61■□□□□ 0.57
TRIM4-202ENST00000354241 FAM47E-STBD1D6RA91 191 aa18.61■□□□□ 0.57
TRIM4-202ENST00000354241 DXOO77932 396 aaKnown RBP18.61■□□□□ 0.57
TRIM4-202ENST00000354241 SLC25A30Q5SVS4 291 aa18.61■□□□□ 0.57
TRIM4-202ENST00000354241 FOXB2Q5VYV0 432 aa18.61■□□□□ 0.57
TRIM4-202ENST00000354241 STX19Q8N4C7 294 aa18.61■□□□□ 0.57
TRIM4-202ENST00000354241 FADS6Q8N9I5 356 aa18.61■□□□□ 0.57
TRIM4-202ENST00000354241 CLEC1AQ8NC01 280 aa18.61■□□□□ 0.57
TRIM4-202ENST00000354241 FGF11Q92914 225 aa18.61■□□□□ 0.57
TRIM4-202ENST00000354241 PTGES2Q9H7Z7 377 aa18.61■□□□□ 0.57
TRIM4-202ENST00000354241 FKBP14Q9NWM8 211 aa18.61■□□□□ 0.57
TRIM4-202ENST00000354241 STMN3Q9NZ72 180 aa18.61■□□□□ 0.57
TRIM4-202ENST00000354241 BLOC1S5-TXNDC5H3BN57 136 aa18.61■□□□□ 0.57
TRIM4-202ENST00000354241 RPL4P36578 427 aaKnown RBP18.61■□□□□ 0.57
TRIM4-202ENST00000354241 APOBEC1P41238 236 aaKnown RBP18.61■□□□□ 0.57
TRIM4-202ENST00000354241 MASP1P48740 699 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms