RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 HOXB13Q92826 284 aaPredicted RBP12.67□□□□□ -0.38
SMC6-201ENST00000351948 TMEM38AQ9H6F2 299 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 ABCD2Q9UBJ2 740 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 A6NIZ1 184 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 MRPL33O75394 65 aaKnown RBP12.67□□□□□ -0.38
SMC6-201ENST00000351948 CD1EP15812 388 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 SLC2A5P22732 501 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 POLR2HP52434 150 aaKnown RBP12.67□□□□□ -0.38
SMC6-201ENST00000351948 RAP1BP61224 184 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 RAP1AP62834 184 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 OCLNQ16625 522 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 TCEAL3Q969E4 200 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 CCDC120Q96HB5 630 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 ZGLP1P0C6A0 271 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 RGS6P49758 472 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 CD83Q01151 205 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 CRMP1Q14194 572 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 NHSL2Q5HYW2 709 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 FBXO42Q6P3S6 717 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 NIPAL3Q6P499 406 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 NDNFQ8TB73 568 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 TMEM163Q8TC26 289 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 ENKD1Q9H0I2 346 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 PRAMEF25A6NGN4 478 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 DLGAP1O14490 977 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 ARHGAP33O14559 1287 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 SLITRK5O94991 958 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 IGFBP1P08833 259 aaPredicted RBP12.67□□□□□ -0.38
SMC6-201ENST00000351948 RRADP55042 308 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 DMPKQ09013 629 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 ABHD12BQ7Z5M8 362 aaPredicted RBP12.67□□□□□ -0.38
SMC6-201ENST00000351948 SLC7A13Q8TCU3 470 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 BORCS8Q96FH0 119 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 SYT4Q9H2B2 425 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 SCN10AQ9Y5Y9 1956 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 TEX13DA0A0J9YY54 714 aaPredicted RBP12.66□□□□□ -0.38
SMC6-201ENST00000351948 A0A1W2PQF6 199 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 EML2O95834 649 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 SCGB1D2O95969 90 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 IGHG1P01857 330 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 OR8G3PP0DMU2 310 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 FOLR1P15328 257 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 RAB3BP20337 219 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 PRKAR1BP31321 381 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 SAXO2Q658L1 398 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 TUBA3EQ6PEY2 450 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 MS4A15Q8N5U1 240 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 SLC6A13Q9NSD5 602 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 FBXL3Q9UKT7 428 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 SPINT1O43278 529 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 CSO75390 466 aaKnown RBP12.66□□□□□ -0.38
SMC6-201ENST00000351948 GTF2F2P13984 249 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 PIGAP37287 484 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 EMX1Q04741 257 aaPredicted RBP12.66□□□□□ -0.38
SMC6-201ENST00000351948 ZNF691Q5VV52 312 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 FIP1L1Q6UN15 594 aaKnown RBP12.66□□□□□ -0.38
SMC6-201ENST00000351948 UGT2A3Q6UWM9 527 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 KCTD9Q7L273 389 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 BCORP1Q8N888 145 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 DEFB124Q8NES8 71 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 GGHQ92820 318 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 CPNE2Q96FN4 548 aaPredicted RBP12.66□□□□□ -0.38
SMC6-201ENST00000351948 CDC6Q99741 560 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 TTYH1Q9H313 450 aaPredicted RBP12.66□□□□□ -0.38
SMC6-201ENST00000351948 MRPS2Q9Y399 296 aaKnown RBP12.66□□□□□ -0.38
SMC6-201ENST00000351948 C13orf42A0A1B0GVH6 325 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 OR2J2O76002 312 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 KCNK2O95069 426 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 PAPLNO95428 1278 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 MAKP20794 623 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 BIDP55957 195 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 ZNF793Q6ZN11 406 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 MBOAT2Q6ZWT7 520 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 ZNF511Q8NB15 262 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 ELP5Q8TE02 316 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 SGCDQ92629 289 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 ITFG2Q969R8 447 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 GDF15Q99988 308 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 MFRPQ9BY79 579 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 MMP27Q9H306 513 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 METTL8Q9H825 291 aaKnown RBP12.66□□□□□ -0.38
SMC6-201ENST00000351948 TMEM72A0PK05 275 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 FOXC1Q12948 553 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 MOGQ16653 247 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 MTFR2Q6P444 385 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 MEPCEQ7L2J0 689 aaKnown RBP12.66□□□□□ -0.38
SMC6-201ENST00000351948 PTRH1Q86Y79 214 aaKnown RBP12.66□□□□□ -0.38
SMC6-201ENST00000351948 SERPINA12Q8IW75 414 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 RASD2Q96D21 266 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 ZNF845Q96IR2 970 aaPredicted RBP12.66□□□□□ -0.38
SMC6-201ENST00000351948 NEDD4LQ96PU5 975 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 EMC6Q9BV81 110 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 CHRDQ9H2X0 955 aa12.66□□□□□ -0.38
SMC6-201ENST00000351948 A8MV72 311 aaPredicted RBP12.65□□□□□ -0.38
SMC6-201ENST00000351948 LRRN3E7EW58 273 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 SOCS6O14544 535 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 C1QAP02745 245 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 COL28A1Q2UY09 1125 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 LINC00346Q8IVM7 164 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 OR7G1Q8NGA0 311 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms