RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 FUNDC1Q8IVP5 155 aa11.76□□□□□ -0.53
CLCC1-202ENST00000348264 CCDC103Q8IW40 242 aa11.76□□□□□ -0.53
CLCC1-202ENST00000348264 MSRB3Q8IXL7 192 aa11.76□□□□□ -0.53
CLCC1-202ENST00000348264 PIGXQ8TBF5 258 aa11.76□□□□□ -0.53
CLCC1-202ENST00000348264 IGFBPL1Q8WX77 278 aa11.76□□□□□ -0.53
CLCC1-202ENST00000348264 MAL2Q969L2 176 aa11.76□□□□□ -0.53
CLCC1-202ENST00000348264 ZHX1-C8orf76Q96EF9 292 aa11.76□□□□□ -0.53
CLCC1-202ENST00000348264 POTEKPQ9BYX7 375 aa11.76□□□□□ -0.53
CLCC1-202ENST00000348264 SLC25A37Q9NYZ2 338 aa11.76□□□□□ -0.53
CLCC1-202ENST00000348264 CALML5Q9NZT1 146 aa11.76□□□□□ -0.53
CLCC1-202ENST00000348264 EMC3Q9P0I2 261 aa11.76□□□□□ -0.53
CLCC1-202ENST00000348264 CHST2Q9Y4C5 530 aa11.76□□□□□ -0.53
CLCC1-202ENST00000348264 A0A096LPI6 279 aa11.75□□□□□ -0.53
CLCC1-202ENST00000348264 NR5A2O00482 541 aa11.75□□□□□ -0.53
CLCC1-202ENST00000348264 ZNF208O43345 1280 aa11.75□□□□□ -0.53
CLCC1-202ENST00000348264 IGHV3-9P01782 118 aa11.75□□□□□ -0.53
CLCC1-202ENST00000348264 PRG2P13727 222 aa11.75□□□□□ -0.53
CLCC1-202ENST00000348264 UQCRBP14927 111 aa11.75□□□□□ -0.53
CLCC1-202ENST00000348264 IGHV1-2P23083 117 aa11.75□□□□□ -0.53
CLCC1-202ENST00000348264 NTF4P34130 210 aa11.75□□□□□ -0.53
CLCC1-202ENST00000348264 ACAA2P42765 397 aaKnown RBP11.75□□□□□ -0.53
CLCC1-202ENST00000348264 SLC16A1P53985 500 aa11.75□□□□□ -0.53
CLCC1-202ENST00000348264 AQP5P55064 265 aa11.75□□□□□ -0.53
CLCC1-202ENST00000348264 OR2B6P58173 313 aa11.75□□□□□ -0.53
CLCC1-202ENST00000348264 RGNQ15493 299 aa11.75□□□□□ -0.53
CLCC1-202ENST00000348264 SHEQ5VZ18 495 aa11.75□□□□□ -0.53
CLCC1-202ENST00000348264 ZNF440Q8IYI8 595 aa11.75□□□□□ -0.53
CLCC1-202ENST00000348264 ZNF100Q8IYN0 542 aa11.75□□□□□ -0.53
CLCC1-202ENST00000348264 LRRC75A-AS1Q8N1F1 130 aa11.75□□□□□ -0.53
CLCC1-202ENST00000348264 C10orf111Q8N326 155 aa11.75□□□□□ -0.53
CLCC1-202ENST00000348264 CLIP4Q8N3C7 705 aa11.75□□□□□ -0.53
CLCC1-202ENST00000348264 DDIT4LQ96D03 193 aa11.75□□□□□ -0.53
CLCC1-202ENST00000348264 PERPQ96FX8 193 aa11.75□□□□□ -0.53
CLCC1-202ENST00000348264 CCDC28BQ9BUN5 200 aa11.75□□□□□ -0.53
CLCC1-202ENST00000348264 ADAM19Q9H013 955 aa11.75□□□□□ -0.53
CLCC1-202ENST00000348264 GSX1Q9H4S2 264 aaPredicted RBP11.75□□□□□ -0.53
CLCC1-202ENST00000348264 SLC52A3Q9NQ40 469 aa11.75□□□□□ -0.53
CLCC1-202ENST00000348264 SLAMF8Q9P0V8 285 aa11.75□□□□□ -0.53
CLCC1-202ENST00000348264 TMEM181Q9P2C4 612 aa11.75□□□□□ -0.53
CLCC1-202ENST00000348264 NOSIPQ9Y314 301 aaKnown RBP11.75□□□□□ -0.53
CLCC1-202ENST00000348264 HEATR1Q9H583 2144 aaKnown RBP11.75□□□□□ -0.53
CLCC1-202ENST00000348264 FN1P02751 2386 aaKnown RBP11.75□□□□□ -0.53
CLCC1-202ENST00000348264 CLIC1O00299 241 aa11.74□□□□□ -0.53
CLCC1-202ENST00000348264 HS3ST1O14792 307 aa11.74□□□□□ -0.53
CLCC1-202ENST00000348264 THBS1P07996 1170 aa11.74□□□□□ -0.53
CLCC1-202ENST00000348264 BMP2P12643 396 aa11.74□□□□□ -0.53
CLCC1-202ENST00000348264 FKBP2P26885 142 aaKnown RBP11.74□□□□□ -0.53
CLCC1-202ENST00000348264 ADSLP30566 484 aaPredicted RBP11.74□□□□□ -0.53
CLCC1-202ENST00000348264 H3F3AP84243 136 aa11.74□□□□□ -0.53
CLCC1-202ENST00000348264 FADDQ13158 208 aa11.74□□□□□ -0.53
CLCC1-202ENST00000348264 CAPRIN1Q14444 709 aaKnown RBP11.74□□□□□ -0.53
CLCC1-202ENST00000348264 STK11Q15831 433 aa11.74□□□□□ -0.53
CLCC1-202ENST00000348264 PAGE3Q5JUK9 113 aa11.74□□□□□ -0.53
CLCC1-202ENST00000348264 NCMAPQ5T1S8 102 aa11.74□□□□□ -0.53
CLCC1-202ENST00000348264 LRIF1Q5T3J3 769 aa11.74□□□□□ -0.53
CLCC1-202ENST00000348264 BLOC1S3Q6QNY0 202 aa11.74□□□□□ -0.53
CLCC1-202ENST00000348264 SERPINA11Q86U17 422 aa11.74□□□□□ -0.53
CLCC1-202ENST00000348264 P3H2Q8IVL5 708 aa11.74□□□□□ -0.53
CLCC1-202ENST00000348264 CADM2Q8N3J6 435 aa11.74□□□□□ -0.53
CLCC1-202ENST00000348264 ZNF433Q8N7K0 673 aaPredicted RBP11.74□□□□□ -0.53
CLCC1-202ENST00000348264 GOLGA6L1Q8N7Z2 621 aa11.74□□□□□ -0.53
CLCC1-202ENST00000348264 DYDC1Q8WWB3 177 aa11.74□□□□□ -0.53
CLCC1-202ENST00000348264 HSD17B8Q92506 261 aa11.74□□□□□ -0.53
CLCC1-202ENST00000348264 AKAP1Q92667 903 aaKnown RBP eCLIP11.74□□□□□ -0.53
CLCC1-202ENST00000348264 APH1AQ96BI3 265 aa11.74□□□□□ -0.53
CLCC1-202ENST00000348264 SPDL1Q96EA4 605 aa11.74□□□□□ -0.53
CLCC1-202ENST00000348264 A4GALTQ9NPC4 353 aa11.74□□□□□ -0.53
CLCC1-202ENST00000348264 THUMPD1Q9NXG2 353 aaKnown RBP11.74□□□□□ -0.53
CLCC1-202ENST00000348264 CCDC167Q9P0B6 97 aa11.74□□□□□ -0.53
CLCC1-202ENST00000348264 TRAPPC4Q9Y296 219 aa11.74□□□□□ -0.53
CLCC1-202ENST00000348264 RNF115Q9Y4L5 304 aa11.74□□□□□ -0.53
CLCC1-202ENST00000348264 ALPK2Q86TB3 2170 aa11.74□□□□□ -0.53
CLCC1-202ENST00000348264 A0A0G2JPF8 293 aa11.73□□□□□ -0.53
CLCC1-202ENST00000348264 TMEM247A6NEH6 219 aa11.73□□□□□ -0.53
CLCC1-202ENST00000348264 HMGB1P1B2RPK0 211 aaPredicted RBP11.73□□□□□ -0.53
CLCC1-202ENST00000348264 HNRNPCL2B2RXH8 293 aa11.73□□□□□ -0.53
CLCC1-202ENST00000348264 HNRNPCL3B7ZW38 293 aa11.73□□□□□ -0.53
CLCC1-202ENST00000348264 GPR171O14626 319 aa11.73□□□□□ -0.53
CLCC1-202ENST00000348264 CLOCKO15516 846 aa11.73□□□□□ -0.53
CLCC1-202ENST00000348264 FRS3O43559 492 aa11.73□□□□□ -0.53
CLCC1-202ENST00000348264 HNRNPCL1O60812 293 aaKnown RBP11.73□□□□□ -0.53
CLCC1-202ENST00000348264 CNOT4O95628 575 aaKnown RBP11.73□□□□□ -0.53
CLCC1-202ENST00000348264 HNRNPCL4P0DMR1 293 aa11.73□□□□□ -0.53
CLCC1-202ENST00000348264 FOSL1P15407 271 aa11.73□□□□□ -0.53
CLCC1-202ENST00000348264 H2AFXP16104 143 aaPredicted RBP11.73□□□□□ -0.53
CLCC1-202ENST00000348264 FOXG1P55316 489 aaPredicted RBP11.73□□□□□ -0.53
CLCC1-202ENST00000348264 SLC35A1P78382 337 aa11.73□□□□□ -0.53
CLCC1-202ENST00000348264 BSPH1Q075Z2 132 aa11.73□□□□□ -0.53
CLCC1-202ENST00000348264 BNIP2Q12982 314 aa11.73□□□□□ -0.53
CLCC1-202ENST00000348264 LARS2Q15031 903 aaKnown RBP11.73□□□□□ -0.53
CLCC1-202ENST00000348264 FBXW9Q5XUX1 488 aa11.73□□□□□ -0.53
CLCC1-202ENST00000348264 WBP2NLQ6ICG8 309 aa11.73□□□□□ -0.53
CLCC1-202ENST00000348264 ZNF611Q8N823 705 aa11.73□□□□□ -0.53
CLCC1-202ENST00000348264 LILRB1Q8NHL6 650 aaPredicted RBP11.73□□□□□ -0.53
CLCC1-202ENST00000348264 NEUROG1Q92886 237 aa11.73□□□□□ -0.53
CLCC1-202ENST00000348264 SMR3AQ99954 134 aa11.73□□□□□ -0.53
CLCC1-202ENST00000348264 SPATA9Q9BWV2 254 aa11.73□□□□□ -0.53
CLCC1-202ENST00000348264 RSPO3Q9BXY4 272 aaPredicted RBP11.73□□□□□ -0.53
CLCC1-202ENST00000348264 RAD21L1Q9H4I0 556 aa11.73□□□□□ -0.53
CLCC1-202ENST00000348264 IKZF5Q9H5V7 419 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms