RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 PRAMEF2O60811 474 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 GATBO75879 557 aaKnown RBP13.7□□□□□ -0.22
NUP50-201ENST00000347635 RAB2AP61019 212 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 TNFRSF17Q02223 184 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 ALG10Q5BKT4 473 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 SLC6A19Q695T7 634 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 FBXO42Q6P3S6 717 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 DEFB123Q8N688 67 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 OR4C15Q8NGM1 316 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 LGALS14Q8TCE9 139 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 FCRL1Q96LA6 429 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 NRIP3Q9NQ35 241 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 ATG4BQ9Y4P1 393 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 PTPRFP10586 1907 aa13.7□□□□□ -0.22
NUP50-201ENST00000347635 PLATP00750 562 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 PRH1P02810 166 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 SRP9P49458 86 aaKnown RBP13.69□□□□□ -0.22
NUP50-201ENST00000347635 RIDAP52758 137 aaKnown RBP13.69□□□□□ -0.22
NUP50-201ENST00000347635 RPS15P62841 145 aaKnown RBP13.69□□□□□ -0.22
NUP50-201ENST00000347635 OR6F1Q8NGZ6 308 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 TMEM234Q8WY98 164 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 METTL7AQ9H8H3 244 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 IGLV3-16A0A075B6K0 115 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 RAB40ALP0C0E4 278 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 AKAIN1P0CW23 69 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 EVX1P49640 407 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 CCR6P51684 374 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 ERVK-25P63136 954 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 RASGEF1BQ0VAM2 473 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 SSX1Q16384 188 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 TMEM64Q6YI46 380 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 FCRLAQ7L513 359 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 ZSCAN1Q8NBB4 408 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 RAB40AQ8WXH6 277 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 MSLNLQ96KJ4 702 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 ARHGAP9Q9BRR9 750 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 CAMK2AQ9UQM7 478 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 PSMB1P20618 241 aaKnown RBP13.69□□□□□ -0.22
NUP50-201ENST00000347635 HTR2AP28223 471 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 BCL6P41182 706 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 RAP2BP61225 183 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 ZNF836Q6ZNA1 936 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 USP53Q70EK8 1073 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 NKAIN4Q8IVV8 208 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 GPR148Q8TDV2 347 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 DNAJA3Q96EY1 480 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 FGF20Q9NP95 211 aaPredicted RBP13.69□□□□□ -0.22
NUP50-201ENST00000347635 FANCFQ9NPI8 374 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 GPRIN2O60269 458 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 CD27P26842 260 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 AIMP2Q13155 320 aaKnown RBP13.69□□□□□ -0.22
NUP50-201ENST00000347635 GPR50Q13585 617 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 CCINQ13939 588 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 FAM76BQ5HYJ3 339 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 C1orf94Q6P1W5 598 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 SLC35F3Q8IY50 421 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 OR52R1Q8NGF1 315 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 FN3KQ9H479 309 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 TMPRSS11EQ9UL52 423 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 ZNF281Q9Y2X9 895 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 MYO9BQ13459 2157 aa13.69□□□□□ -0.22
NUP50-201ENST00000347635 TMEM265A0A087WTH1 108 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 AFF3P51826 1226 aaKnown RBP13.68□□□□□ -0.22
NUP50-201ENST00000347635 SIRPAP78324 504 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 DPTQ07507 201 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 TPBGQ13641 420 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 RPE65Q16518 533 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 SLC18B1Q6NT16 456 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 ABHD17CQ6PCB6 329 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 FOXRED2Q8IWF2 684 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 TCTE3Q8IZS6 198 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 C10orf111Q8N326 155 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 KLHL15Q96M94 604 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 DEFB126Q9BYW3 111 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 TMPRSS11DO60235 418 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 PDGFAP04085 211 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 KIR2DL3P43628 341 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 EPHA5P54756 1037 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 DLX5P56178 289 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 EDAQ92838 391 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 PEX11GQ96HA9 241 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 TMEM41AQ96HV5 264 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 WDFY2Q96P53 400 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 SLC6A7Q99884 636 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 GAPDHSO14556 408 aaPredicted RBP13.68□□□□□ -0.22
NUP50-201ENST00000347635 HCKP08631 526 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 S100GP29377 79 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 BTN2A1Q7KYR7 527 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 GLCCI1Q86VQ1 547 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 OR6V1Q8N148 313 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 C20orf85Q9H1P6 137 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 SEC61A2Q9H9S3 476 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 LRIT2A6NDA9 550 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 SDC3O75056 442 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 OR2T7P0C7T2 308 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 BSGP35613 385 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 CRYBB2P43320 205 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 OPCMLQ14982 345 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 VASH1Q7L8A9 365 aaPredicted RBP13.68□□□□□ -0.22
NUP50-201ENST00000347635 ADIPOR2Q86V24 386 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms