RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 LRRTM2O43300 516 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 EIF4E2O60573 245 aaKnown RBP12.34□□□□□ -0.43
CDC42-202ENST00000344548 GYPBP06028 91 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 RPS5P46782 204 aaKnown RBP12.34□□□□□ -0.43
CDC42-202ENST00000344548 MTNR1AP48039 350 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 P2RX1P51575 399 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 CDH11P55287 796 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 VBP1P61758 197 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 NCS1P62166 190 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 NFATC3Q12968 1075 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 CRMP1Q14194 572 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 ZNF74Q16587 644 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 C3orf38Q5JPI3 329 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 OR2G6Q5TZ20 316 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 CXXC5Q7LFL8 322 aaKnown RBP12.34□□□□□ -0.43
CDC42-202ENST00000344548 PRSS33Q8NF86 280 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 OR5L2Q8NGL0 311 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 PLEKHA8Q96JA3 519 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 TAAR9Q96RI9 348 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 STRADBQ9C0K7 418 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 ZNF700Q9H0M5 742 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 RNF167Q9H6Y7 350 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 ZNF160Q9HCG1 818 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 MMP25Q9NPA2 562 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 AKAP7Q9P0M2 348 aaPredicted RBP12.34□□□□□ -0.43
CDC42-202ENST00000344548 PCDHGA3Q9Y5H0 932 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 RIF1Q5UIP0 2472 aaKnown RBP12.34□□□□□ -0.43
CDC42-202ENST00000344548 SHISA8B8ZZ34 492 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 PLD2O14939 933 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 ITGA10O75578 1167 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 OR7A10O76100 309 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 GABARAPO95166 117 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 SOX3P41225 446 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 FOXK1P85037 733 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 Q0VFX4 171 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 ARMCX4Q5H9R4 360 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 HES3Q5TGS1 186 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 ARSKQ6UWY0 536 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 RTL4Q6ZR62 310 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 PPP1R32Q7Z5V6 425 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 ADGRG3Q86Y34 549 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 SLC37A3Q8NCC5 494 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 ZPLD1Q8TCW7 415 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 RAB2BQ8WUD1 216 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 RNF138Q8WVD3 245 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 ZNRF4Q8WWF5 429 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 LIN37Q96GY3 246 aaPredicted RBP12.34□□□□□ -0.43
CDC42-202ENST00000344548 ZNF649Q9BS31 505 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 CMC2Q9NRP2 79 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 MRPS18AQ9NVS2 196 aaKnown RBP12.34□□□□□ -0.43
CDC42-202ENST00000344548 CHRNA9Q9UGM1 479 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 TCFL5Q9UL49 500 aa12.34□□□□□ -0.43
CDC42-202ENST00000344548 ZNF292O60281 2723 aa12.33□□□□□ -0.44
CDC42-202ENST00000344548 ZFHX2Q9C0A1 2572 aaPredicted RBP12.33□□□□□ -0.44
CDC42-202ENST00000344548 PRR33A8MZF0 331 aa12.33□□□□□ -0.44
CDC42-202ENST00000344548 HMGN1P05114 100 aa12.33□□□□□ -0.44
CDC42-202ENST00000344548 PNMTP11086 282 aa12.33□□□□□ -0.44
CDC42-202ENST00000344548 HIST1H1CP16403 213 aaKnown RBP12.33□□□□□ -0.44
CDC42-202ENST00000344548 GADD45AP24522 165 aa12.33□□□□□ -0.44
CDC42-202ENST00000344548 AQP2P41181 271 aa12.33□□□□□ -0.44
CDC42-202ENST00000344548 FOLR3P41439 243 aa12.33□□□□□ -0.44
CDC42-202ENST00000344548 RAB15P59190 212 aa12.33□□□□□ -0.44
CDC42-202ENST00000344548 RPS4XP62701 263 aaKnown RBP12.33□□□□□ -0.44
CDC42-202ENST00000344548 E2F1Q01094 437 aa12.33□□□□□ -0.44
CDC42-202ENST00000344548 ITGADQ13349 1161 aa12.33□□□□□ -0.44
CDC42-202ENST00000344548 SSX1Q16384 188 aa12.33□□□□□ -0.44
CDC42-202ENST00000344548 NXNL2Q5VZ03 156 aa12.33□□□□□ -0.44
CDC42-202ENST00000344548 C6orf15Q6UXA7 325 aaPredicted RBP12.33□□□□□ -0.44
CDC42-202ENST00000344548 P2RY8Q86VZ1 359 aa12.33□□□□□ -0.44
CDC42-202ENST00000344548 SIRT6Q8N6T7 355 aa12.33□□□□□ -0.44
CDC42-202ENST00000344548 NANOGP1Q8N7R0 232 aa12.33□□□□□ -0.44
CDC42-202ENST00000344548 OR4K13Q8NH42 304 aa12.33□□□□□ -0.44
CDC42-202ENST00000344548 B4GALNT2Q8NHY0 566 aa12.33□□□□□ -0.44
CDC42-202ENST00000344548 NDNFQ8TB73 568 aa12.33□□□□□ -0.44
CDC42-202ENST00000344548 KISS1RQ969F8 398 aaPredicted RBP12.33□□□□□ -0.44
CDC42-202ENST00000344548 ERMAPQ96PL5 475 aaPredicted RBP12.33□□□□□ -0.44
CDC42-202ENST00000344548 MGLLQ99685 303 aa12.33□□□□□ -0.44
CDC42-202ENST00000344548 TMEM43Q9BTV4 400 aa12.33□□□□□ -0.44
CDC42-202ENST00000344548 OR11A1Q9GZK7 315 aa12.33□□□□□ -0.44
CDC42-202ENST00000344548 GPN2Q9H9Y4 310 aaPredicted RBP12.33□□□□□ -0.44
CDC42-202ENST00000344548 KLHL1Q9NR64 748 aa12.33□□□□□ -0.44
CDC42-202ENST00000344548 MED17Q9NVC6 651 aa12.33□□□□□ -0.44
CDC42-202ENST00000344548 IER3IP1Q9Y5U9 82 aa12.33□□□□□ -0.44
CDC42-202ENST00000344548 CNOT1A5YKK6 2376 aaKnown RBP12.33□□□□□ -0.44
CDC42-202ENST00000344548 MUC6Q6W4X9 2439 aa12.33□□□□□ -0.44
CDC42-202ENST00000344548 BLOC1S5-TXNDC5H3BN57 136 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 LIMS3P0CW19 117 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 LIMS4P0CW20 117 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 PEPDP12955 493 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 OTX2P32243 289 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 SLC6A8P48029 635 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 TRIP6Q15654 476 aaKnown RBP12.32□□□□□ -0.44
CDC42-202ENST00000344548 CSRP2Q16527 193 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 LHFPL3Q86UP9 236 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 GALNT15Q8N3T1 639 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 C10orf53Q8N6V4 93 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 SDR9C7Q8NEX9 313 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 OPALINQ96PE5 141 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 OR51E2Q9H255 320 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 FN3KQ9H479 309 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms