RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 NIT1Q86X76 327 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 SYT14Q8NB59 555 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 MCEEQ96PE7 176 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 PARD6GQ9BYG4 376 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 CDC42EP3Q9UKI2 254 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 NDRG4Q9ULP0 352 aaKnown RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 MEIKINA0A087WXM9 373 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 MTMR11A4FU01 709 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 PDHXO00330 501 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 UBL3O95164 117 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 CD58P19256 250 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 ITGA6P23229 1130 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 CSNK1DP48730 415 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 ARRB1P49407 418 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 NDUFV1P49821 464 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 RIPPLY3P57055 190 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 MLF1P58340 268 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 SOX4Q06945 474 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 EML3Q32P44 896 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 FBXL19Q6PCT2 694 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 SGCZQ96LD1 299 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 MMP26Q9NRE1 261 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 UROSP10746 265 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 FABP4P15090 132 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 GJA5P36382 358 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 UBE2G2P60604 165 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 TECPR1Q7Z6L1 1165 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 MRPL43Q8N983 215 aaKnown RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 MIB2Q96AX9 1013 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 DAZAP1Q96EP5 407 aaKnown RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 PITX2Q99697 317 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 ANGPTL4Q9BY76 406 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 AAASQ9NRG9 546 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF629Q9UEG4 869 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 SLIT1O75093 1534 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 SLC22A31A6NKX4 558 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 PEX11BO96011 259 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 CYB5R3P00387 301 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 PRKACGP22612 351 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 IRS1P35568 1242 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 EMP1P54849 157 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 MFGE8Q08431 387 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 GRASPQ7Z6J2 395 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF433Q8N7K0 673 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 UBALD1Q8TB05 177 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 NT5C3BQ969T7 300 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 RGMAQ96B86 450 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 LHPPQ9H008 270 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 HRH4Q9H3N8 390 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 OXSMQ9NWU1 459 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 YARS2Q9Y2Z4 477 aaKnown RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 LOC285095A0A1B0GVY8 99 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 H7BY64 318 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 KLRC4O43908 158 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 AOC2O75106 756 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 THPOP40225 353 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 TLE1Q04724 770 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 EMX1Q04741 257 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 PRAP1Q96NZ9 151 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 GDF15Q99988 308 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 TBL1XR1Q9BZK7 514 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 SDR39U1Q9NRG7 319 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 RAB22AQ9UL26 194 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 CBLCQ9ULV8 474 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 K7EP13 123 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 M0QYT0 321 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 TPP1O14773 563 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 DEGS1O15121 323 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 SPDEFO95238 335 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 GABRB3P28472 473 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 CD86P42081 329 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 MEP1BQ16820 701 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 SGPP2Q8IWX5 399 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 FBXL3Q9UKT7 428 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 DNMT3AQ9Y6K1 912 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 SOCS5O75159 536 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 C8GP07360 202 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 MELTFP08582 738 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 FABP2P12104 132 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 GGT1P19440 569 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 PPM1AP35813 382 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF691Q5VV52 312 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 ETFBKMTQ8IXQ9 262 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 YIPF6Q96EC8 236 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 RABAC1Q9UI14 185 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 ABHD14A-ACY1A0A1B0GW23 586 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 DCDC2BA2VCK2 349 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 SCAMP2O15127 329 aaKnown RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 GOSR1O95249 250 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 NDUFB7P17568 137 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 SSTR4P31391 388 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 RNF144AP50876 292 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 BACE1P56817 501 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 MLLT11Q13015 90 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 AGERQ15109 404 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 SEZ6Q53EL9 994 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 NXPE1Q8N323 547 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 OR4F15Q8NGB8 312 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 OR2T4Q8NH00 348 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 GPR119Q8TDV5 335 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms