RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 ERVK-10P10266 1014 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 ANXA3P12429 323 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 CD79BP40259 229 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 IRF9Q00978 393 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 TP53BP2Q13625 1128 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 COTL1Q14019 142 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 MAD2L1BPQ15013 274 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-202ENST00000343599 SEC23BQ15437 767 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 FCN2Q15485 313 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 KLHL22Q53GT1 634 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 GPRC6AQ5T6X5 926 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 MLIPQ5VWP3 458 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 RBMS3Q6XE24 437 aaKnown RBP6.7□□□□□ -1.34
ZNF540-202ENST00000343599 EIF3MQ7L2H7 374 aaKnown RBP6.7□□□□□ -1.34
ZNF540-202ENST00000343599 NLRC3Q7RTR2 1065 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 TMEM132CQ8N3T6 1108 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 NANOGP1Q8N7R0 232 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 GPR26Q8NDV2 337 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 OR9I1Q8NGQ6 314 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 ZNF845Q96IR2 970 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-202ENST00000343599 RBBP8Q99708 897 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 H2AFJQ9BTM1 129 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 PRR14Q9BWN1 585 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 BARHL1Q9BZE3 327 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 PRDM14Q9GZV8 571 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 NDUFAF4Q9P032 175 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 SEC14L3Q9UDX4 400 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 FBXL2Q9UKC9 423 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 ICKQ9UPZ9 632 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 IGSF10Q6WRI0 2623 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 MYO18BQ8IUG5 2567 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 CACNA1BQ00975 2339 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 A0A096LPK6 155 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 E9PQ18 207 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 M0R233 179 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 TLX2O43763 284 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-202ENST00000343599 CNOT4O95628 575 aaKnown RBP6.7□□□□□ -1.34
ZNF540-202ENST00000343599 APOC3P02656 99 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 APRTP07741 180 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 SPP1P10451 314 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 UGT2B7P16662 529 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 TPH1P17752 444 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 RAB4AP20338 218 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 ARL4DP49703 201 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 NR0B1P51843 470 aaKnown RBP6.7□□□□□ -1.34
ZNF540-202ENST00000343599 C2orf80Q0P641 193 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 LBHQ53QV2 105 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-202ENST00000343599 PGAP1Q75T13 922 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 DENND6AQ8IWF6 608 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 RYBPQ8N488 228 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-202ENST00000343599 OR11H7Q8NGC8 314 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 OR5K1Q8NHB7 308 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.7□□□□□ -1.34
ZNF540-202ENST00000343599 ZPLD1Q8TCW7 415 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 NANOS1Q8WY41 292 aaKnown RBP6.7□□□□□ -1.34
ZNF540-202ENST00000343599 DIO2Q92813 273 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 C14orf144Q96I85 54 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 SFXN2Q96NB2 322 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 DMRT3Q9NQL9 472 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 KRT84Q9NSB2 600 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 NSMCE4AQ9NXX6 385 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 CNIH4Q9P003 139 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 HCN3Q9P1Z3 774 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 MAGEL2Q9UJ55 1249 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 ING1Q9UK53 422 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-202ENST00000343599 CDH10Q9Y6N8 788 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 LAMA2P24043 3122 aaKnown RBP6.7□□□□□ -1.34
ZNF540-202ENST00000343599 TEX13CA0A0J9YWL9 993 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 C7orf66A4D0T2 115 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 C5orf52A6NGY3 159 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 KCNK1O00180 336 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 ADAM10O14672 748 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 SEMA7AO75326 666 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 ATG12O94817 140 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 SLC25A14O95258 325 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-202ENST00000343599 IFNGP01579 166 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 PAICSP22234 425 aaKnown RBP6.7□□□□□ -1.34
ZNF540-202ENST00000343599 PPP2R1BP30154 601 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 POU4F1Q01851 419 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 CAMK2DQ13557 499 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 PMS2P11Q13670 270 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 TIMM50Q3ZCQ8 353 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 CPZQ66K79 652 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 ANKRD34AQ69YU3 496 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 BICRALQ6AI39 1079 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 FAM131AQ6UXB0 335 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 RNF165Q6ZSG1 346 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 LARP4Q71RC2 724 aaKnown RBP eCLIP6.7□□□□□ -1.34
ZNF540-202ENST00000343599 ADGRE4PQ86SQ3 457 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 GLCCI1Q86VQ1 547 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 CPOQ8IVL8 374 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 ENTHD1Q8IYW4 607 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 PRR18Q8N4B5 295 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 WDSUB1Q8N9V3 476 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 TSPEARQ8WU66 669 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 RNASE6Q93091 150 aaKnown RBP6.7□□□□□ -1.34
ZNF540-202ENST00000343599 ZBED6CLQ96FA7 236 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-202ENST00000343599 PFDN5Q99471 154 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 VRK1Q99986 396 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-202ENST00000343599 CMSS1Q9BQ75 279 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms