RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 LMF2Q9BU23 707 aaKnown RBP4.46□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF304Q9HCX3 659 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF225Q9UK10 706 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 CPN1P15169 458 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 PGCP20142 388 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 SLC6A8P48029 635 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 CTXN1P60606 82 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 GXYLT1Q4G148 440 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 RTP2Q5QGT7 225 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 SUMF2Q8NBJ7 301 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 OR1M1Q8NGA1 313 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 SCGB1C1Q8TD33 95 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 GIMAP5Q96F15 307 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 SLC38A3Q99624 504 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 LUZP4Q9P127 313 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 NDRG3Q9UGV2 375 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 TRAV1-2A0A0B4J238 106 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 GLTPD2A6NH11 291 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 TVP23AA6NH52 213 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 TOR1AO14656 332 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 HCRTR2O43614 444 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 RAD51DO75771 328 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 ELNP15502 786 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 SPIN3Q5JUX0 258 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 NAXDQ8IW45 347 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 ESX1Q8N693 406 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 CCDC71LQ8N9Z2 235 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 HMGB4Q8WW32 186 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 NXF2Q9GZY0 626 aaKnown RBP4.46□□□□□ -1.7
CSMD3-203ENST00000343508 HRH4Q9H3N8 390 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 FBXL2Q9UKC9 423 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 HS3ST2Q9Y278 367 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 TTC3P53804 2025 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 SLC22A23A1A5C7 686 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 TRIM64A6NGJ6 449 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 EIF2S3P41091 472 aaKnown RBP4.46□□□□□ -1.7
CSMD3-203ENST00000343508 SLC6A12P48065 614 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 HERV-K104P61576 105 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 CXADRP78310 365 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 H3F3CQ6NXT2 135 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 PTOV1Q86YD1 416 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 RBP7Q96R05 134 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 TEAD3Q99594 435 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 NELFAQ9H3P2 528 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 SYNPO2LQ9H987 977 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 C2orf42Q9NWW7 574 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 FBXL12Q9NXK8 326 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 FBXL4Q9UKA2 621 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF175Q9Y473 711 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 RHPN2P1A8MT19 583 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 GPR171O14626 319 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 AHSA1O95433 338 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 UBL4AP11441 157 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 HOXD11P31277 338 aaPredicted RBP4.46□□□□□ -1.7
CSMD3-203ENST00000343508 TPBGQ13641 420 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 C3orf49Q96BT1 292 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 LMF1Q96S06 567 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 CYSLTR2Q9NS75 346 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF701Q9NV72 531 aaPredicted RBP4.46□□□□□ -1.7
CSMD3-203ENST00000343508 SIDT1Q9NXL6 827 aaKnown RBP4.46□□□□□ -1.7
CSMD3-203ENST00000343508 ATG4BQ9Y4P1 393 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 SLC22A7Q9Y694 548 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 BLACEA4D250 179 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 SOX1O00570 391 aaPredicted RBP4.46□□□□□ -1.7
CSMD3-203ENST00000343508 CTDSPLO15194 276 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 PAPLNO95428 1278 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 HIST1H1TP22492 207 aaPredicted RBP4.46□□□□□ -1.7
CSMD3-203ENST00000343508 PLA2G7Q13093 441 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 RPE65Q16518 533 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 GPR139Q6DWJ6 353 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 FAM71E1Q6IPT2 247 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 ACOT7LQ6ZUV0 252 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 SPICQ8N5J4 248 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 OR4K17Q8NGC6 315 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 OR10Z1Q8NGY1 313 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 TERB2Q8NHR7 220 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 GOT1L1Q8NHS2 421 aaPredicted RBP4.46□□□□□ -1.7
CSMD3-203ENST00000343508 LGALS14Q8TCE9 139 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 HOXB13Q92826 284 aaPredicted RBP4.46□□□□□ -1.7
CSMD3-203ENST00000343508 LYSMD1Q96S90 227 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 PRMT8Q9NR22 394 aaPredicted RBP4.46□□□□□ -1.7
CSMD3-203ENST00000343508 TLR9Q9NR96 1032 aa4.46□□□□□ -1.7
CSMD3-203ENST00000343508 A0A1B0GTL3 188 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 AGAP14A8MT82 685 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 AIPO00170 330 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 THBS1P07996 1170 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 ACSM4P0C7M7 580 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 CLEC2LP0C7M8 214 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 POU3F3P20264 500 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-203ENST00000343508 SLC6A9P48067 706 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 DOC2BQ14184 412 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 DEFB134Q4QY38 66 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 PAN3Q58A45 887 aaKnown RBP4.45□□□□□ -1.7
CSMD3-203ENST00000343508 LY6G5CQ5SRR4 150 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 B3GLCTQ6Y288 498 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 MAMDC2Q7Z304 686 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-203ENST00000343508 PRICKLE2Q7Z3G6 844 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 LIX1LQ8IVB5 337 aa4.45□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF679Q8IYX0 411 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms