RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 KRT80Q6KB66 452 aa9.24□□□□□ -0.93
ATXN3-201ENST00000340660 C1orf122Q6ZSJ8 110 aa9.24□□□□□ -0.93
ATXN3-201ENST00000340660 CTAGE4Q8IX94 777 aa9.24□□□□□ -0.93
ATXN3-201ENST00000340660 ZFP90Q8TF47 636 aa9.24□□□□□ -0.93
ATXN3-201ENST00000340660 RAB1CQ92928 201 aa9.24□□□□□ -0.93
ATXN3-201ENST00000340660 LINGO1Q96FE5 620 aa9.24□□□□□ -0.93
ATXN3-201ENST00000340660 TIMD4Q96H15 378 aa9.24□□□□□ -0.93
ATXN3-201ENST00000340660 CHID1Q9BWS9 393 aa9.24□□□□□ -0.93
ATXN3-201ENST00000340660 ZNF717Q9BY31 904 aaPredicted RBP9.24□□□□□ -0.93
ATXN3-201ENST00000340660 OR51B5Q9H339 312 aa9.24□□□□□ -0.93
ATXN3-201ENST00000340660 EDA2RQ9HAV5 297 aa9.24□□□□□ -0.93
ATXN3-201ENST00000340660 PPANQ9NQ55 473 aaKnown RBP9.24□□□□□ -0.93
ATXN3-201ENST00000340660 FBXO6Q9NRD1 293 aaPredicted RBP9.24□□□□□ -0.93
ATXN3-201ENST00000340660 NOSIPQ9Y314 301 aaKnown RBP9.24□□□□□ -0.93
ATXN3-201ENST00000340660 USH1CQ9Y6N9 552 aa9.24□□□□□ -0.93
ATXN3-201ENST00000340660 IGKV3D-15A0A087WSY6 115 aa9.23□□□□□ -0.93
ATXN3-201ENST00000340660 IGHV1-69-2A0A0G2JMI3 117 aa9.23□□□□□ -0.93
ATXN3-201ENST00000340660 ISPDA4D126 451 aa9.23□□□□□ -0.93
ATXN3-201ENST00000340660 ANKRD34BA5PLL1 514 aa9.23□□□□□ -0.93
ATXN3-201ENST00000340660 A8MXK9 166 aa9.23□□□□□ -0.93
ATXN3-201ENST00000340660 PLPP1O14494 284 aa9.23□□□□□ -0.93
ATXN3-201ENST00000340660 DUS4LO95620 317 aaKnown RBP9.23□□□□□ -0.93
ATXN3-201ENST00000340660 TTC4O95801 387 aa9.23□□□□□ -0.93
ATXN3-201ENST00000340660 RGS4P49798 205 aa9.23□□□□□ -0.93
ATXN3-201ENST00000340660 TUBA1BP68363 451 aa9.23□□□□□ -0.93
ATXN3-201ENST00000340660 TUBA4AP68366 448 aa9.23□□□□□ -0.93
ATXN3-201ENST00000340660 MRPS35P82673 323 aaKnown RBP9.23□□□□□ -0.93
ATXN3-201ENST00000340660 DAG1Q14118 895 aa9.23□□□□□ -0.93
ATXN3-201ENST00000340660 C3orf36Q3SXR2 165 aa9.23□□□□□ -0.93
ATXN3-201ENST00000340660 TUBA1AQ71U36 451 aa9.23□□□□□ -0.93
ATXN3-201ENST00000340660 OR4K14Q8NGD5 310 aa9.23□□□□□ -0.93
ATXN3-201ENST00000340660 LINC00476Q8WZB0 136 aa9.23□□□□□ -0.93
ATXN3-201ENST00000340660 C16orf58Q96GQ5 468 aa9.23□□□□□ -0.93
ATXN3-201ENST00000340660 VSTM2LQ96N03 204 aa9.23□□□□□ -0.93
ATXN3-201ENST00000340660 PCDHAC1Q9H158 963 aa9.23□□□□□ -0.93
ATXN3-201ENST00000340660 VPS11Q9H270 941 aa9.23□□□□□ -0.93
ATXN3-201ENST00000340660 A0A0A6YYD5 115 aa9.22□□□□□ -0.93
ATXN3-201ENST00000340660 ZNF716A6NP11 495 aa9.22□□□□□ -0.93
ATXN3-201ENST00000340660 TNFRSF13BO14836 293 aaPredicted RBP9.22□□□□□ -0.93
ATXN3-201ENST00000340660 WDR47O94967 919 aa9.22□□□□□ -0.93
ATXN3-201ENST00000340660 H2AFZP0C0S5 128 aa9.22□□□□□ -0.93
ATXN3-201ENST00000340660 PORP16435 677 aaPredicted RBP9.22□□□□□ -0.93
ATXN3-201ENST00000340660 CHATP28329 748 aa9.22□□□□□ -0.93
ATXN3-201ENST00000340660 MARCKSL1P49006 195 aa9.22□□□□□ -0.93
ATXN3-201ENST00000340660 TGFBR3Q03167 851 aa9.22□□□□□ -0.93
ATXN3-201ENST00000340660 FOXF1Q12946 379 aa9.22□□□□□ -0.93
ATXN3-201ENST00000340660 LTB4RQ15722 352 aa9.22□□□□□ -0.93
ATXN3-201ENST00000340660 GRAMD1BQ3KR37 738 aa9.22□□□□□ -0.93
ATXN3-201ENST00000340660 ALKBH6Q3KRA9 238 aa9.22□□□□□ -0.93
ATXN3-201ENST00000340660 KHDRBS2Q5VWX1 349 aaKnown RBP9.22□□□□□ -0.93
ATXN3-201ENST00000340660 ABLIM2Q6H8Q1 611 aa9.22□□□□□ -0.93
ATXN3-201ENST00000340660 H2AFVQ71UI9 128 aa9.22□□□□□ -0.93
ATXN3-201ENST00000340660 COMTD1Q86VU5 262 aa9.22□□□□□ -0.93
ATXN3-201ENST00000340660 DENND6AQ8IWF6 608 aa9.22□□□□□ -0.93
ATXN3-201ENST00000340660 RNF175Q8N4F7 328 aa9.22□□□□□ -0.93
ATXN3-201ENST00000340660 BOD1Q96IK1 185 aa9.22□□□□□ -0.93
ATXN3-201ENST00000340660 ARL5BQ96KC2 179 aa9.22□□□□□ -0.93
ATXN3-201ENST00000340660 CITED2Q99967 270 aaPredicted RBP9.22□□□□□ -0.93
ATXN3-201ENST00000340660 CCDC68Q9H2F9 335 aa9.22□□□□□ -0.93
ATXN3-201ENST00000340660 OBP2BQ9NPH6 170 aa9.22□□□□□ -0.93
ATXN3-201ENST00000340660 EMC3Q9P0I2 261 aa9.22□□□□□ -0.93
ATXN3-201ENST00000340660 A0A1B0GW55 424 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 SDR42E2A6NKP2 422 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 ERI2A8K979 691 aaKnown RBP9.21□□□□□ -0.94
ATXN3-201ENST00000340660 NR5A2O00482 541 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 IGKV3-15P01624 115 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 ATP1B1P05026 303 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 FAM58BPP0C7Q3 252 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 DUX4L2P0CJ85 424 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 DUX4L3P0CJ86 424 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 DUX4L5P0CJ88 424 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 DUX4L6P0CJ89 424 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 DUX4L7P0CJ90 424 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 ELK4P28324 431 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 TGFBR2P37173 567 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 CASP2P42575 452 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 MAGEA8P43361 318 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 SLC6A9P48067 706 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 HNRNPA0Q13151 305 aaKnown RBP9.21□□□□□ -0.94
ATXN3-201ENST00000340660 DHX34Q14147 1143 aaKnown RBP9.21□□□□□ -0.94
ATXN3-201ENST00000340660 HFEQ30201 348 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 TBRG1Q3YBR2 411 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 MMEL1Q495T6 779 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 DUX4L9Q6RFH8 374 aaPredicted RBP9.21□□□□□ -0.94
ATXN3-201ENST00000340660 USP51Q70EK9 711 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 LDLRAD3Q86YD5 345 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 SBSPONQ8IVN8 264 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 SLC44A2Q8IWA5 706 aaPredicted RBP9.21□□□□□ -0.94
ATXN3-201ENST00000340660 MUC20Q8N307 709 aaPredicted RBP9.21□□□□□ -0.94
ATXN3-201ENST00000340660 ATP6V1C2Q8NEY4 427 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 ISOC1Q96CN7 298 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 RBBP8Q99708 897 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 RHOXF2Q9BQY4 288 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 WDR41Q9HAD4 459 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 NOX3Q9HBY0 568 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 DUX4Q9UBX2 424 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 FZR1Q9UM11 496 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 DNAH11Q96DT5 4516 aa9.21□□□□□ -0.94
ATXN3-201ENST00000340660 GJE1A6NN92 205 aa9.2□□□□□ -0.94
ATXN3-201ENST00000340660 RNASEK-C17orf49H0YIS7 233 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 561.9 ms