RNA–Protein interactions for RNA: ENST00000339394.6

SDC3-202, Transcript of syndecan 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-202ENST00000339394 ESPNLQ6ZVH7 1005 aa19.94■□□□□ 0.78
SDC3-202ENST00000339394 OR52J3Q8NH60 311 aa19.94■□□□□ 0.78
SDC3-202ENST00000339394 TMEM255BQ8WV15 326 aa19.94■□□□□ 0.78
SDC3-202ENST00000339394 PYDC1Q8WXC3 89 aa19.94■□□□□ 0.78
SDC3-202ENST00000339394 MIB2Q96AX9 1013 aa19.94■□□□□ 0.78
SDC3-202ENST00000339394 DNAJA3Q96EY1 480 aa19.94■□□□□ 0.78
SDC3-202ENST00000339394 ADGRG7Q96K78 797 aa19.94■□□□□ 0.78
SDC3-202ENST00000339394 DHRS1Q96LJ7 313 aa19.94■□□□□ 0.78
SDC3-202ENST00000339394 OR5B2Q96R09 309 aa19.94■□□□□ 0.78
SDC3-202ENST00000339394 YY1AP1Q9H869 796 aa19.94■□□□□ 0.78
SDC3-202ENST00000339394 PNPLA3Q9NST1 481 aa19.94■□□□□ 0.78
SDC3-202ENST00000339394 ARMC1Q9NVT9 282 aa19.94■□□□□ 0.78
SDC3-202ENST00000339394 CAMK2AQ9UQM7 478 aa19.94■□□□□ 0.78
SDC3-202ENST00000339394 ZNF835Q9Y2P0 537 aa19.94■□□□□ 0.78
SDC3-202ENST00000339394 TNFSF11O14788 317 aa19.93■□□□□ 0.78
SDC3-202ENST00000339394 SLC19A2O60779 497 aa19.93■□□□□ 0.78
SDC3-202ENST00000339394 RRM2P31350 389 aa19.93■□□□□ 0.78
SDC3-202ENST00000339394 SPIBQ01892 262 aa19.93■□□□□ 0.78
SDC3-202ENST00000339394 RBPJQ06330 500 aa19.93■□□□□ 0.78
SDC3-202ENST00000339394 EMC4Q5J8M3 183 aa19.93■□□□□ 0.78
SDC3-202ENST00000339394 PM20D2Q8IYS1 436 aa19.93■□□□□ 0.78
SDC3-202ENST00000339394 MEIOBQ8N635 442 aa19.93■□□□□ 0.78
SDC3-202ENST00000339394 FAM57AQ8TBR7 257 aa19.93■□□□□ 0.78
SDC3-202ENST00000339394 SLC7A13Q8TCU3 470 aa19.93■□□□□ 0.78
SDC3-202ENST00000339394 STK35Q8TDR2 534 aa19.93■□□□□ 0.78
SDC3-202ENST00000339394 TMEM43Q9BTV4 400 aa19.93■□□□□ 0.78
SDC3-202ENST00000339394 ALKBH4Q9NXW9 302 aa19.93■□□□□ 0.78
SDC3-202ENST00000339394 A0A1W2PNR3 127 aa19.92■□□□□ 0.78
SDC3-202ENST00000339394 CST1P01037 141 aa19.92■□□□□ 0.78
SDC3-202ENST00000339394 TPOP07202 933 aa19.92■□□□□ 0.78
SDC3-202ENST00000339394 MYBPHQ13203 477 aa19.92■□□□□ 0.78
SDC3-202ENST00000339394 OR2T5Q6IEZ7 315 aa19.92■□□□□ 0.78
SDC3-202ENST00000339394 TTC33Q6PID6 262 aaPredicted RBP19.92■□□□□ 0.78
SDC3-202ENST00000339394 OR2T29Q8NH02 315 aa19.92■□□□□ 0.78
SDC3-202ENST00000339394 TMEM239Q8WW34 195 aa19.92■□□□□ 0.78
SDC3-202ENST00000339394 KTI12Q96EK9 354 aaPredicted RBP19.92■□□□□ 0.78
SDC3-202ENST00000339394 POTEKPQ9BYX7 375 aa19.92■□□□□ 0.78
SDC3-202ENST00000339394 ANKRD19PQ9H560 264 aa19.92■□□□□ 0.78
SDC3-202ENST00000339394 HDGFL3Q9Y3E1 203 aa19.92■□□□□ 0.78
SDC3-202ENST00000339394 DNAJC13O75165 2243 aa19.92■□□□□ 0.78
SDC3-202ENST00000339394 SVILO95425 2214 aa19.92■□□□□ 0.78
SDC3-202ENST00000339394 TIPRLO75663 272 aa19.91■□□□□ 0.78
SDC3-202ENST00000339394 KRT36O76013 467 aa19.91■□□□□ 0.78
SDC3-202ENST00000339394 GADD45GO95257 159 aa19.91■□□□□ 0.78
SDC3-202ENST00000339394 RBM34P42696 430 aaKnown RBP19.91■□□□□ 0.78
SDC3-202ENST00000339394 EIF1AXP47813 144 aaKnown RBP19.91■□□□□ 0.78
SDC3-202ENST00000339394 SMIM11AP58511 58 aa19.91■□□□□ 0.78
SDC3-202ENST00000339394 LSM11P83369 360 aaKnown RBP eCLIP19.91■□□□□ 0.78
SDC3-202ENST00000339394 IGFBP7Q16270 282 aa19.91■□□□□ 0.78
SDC3-202ENST00000339394 C1orf140Q5VVS0 124 aa19.91■□□□□ 0.78
SDC3-202ENST00000339394 HBMQ6B0K9 141 aa19.91■□□□□ 0.78
SDC3-202ENST00000339394 TMPPEQ6ZT21 453 aa19.91■□□□□ 0.78
SDC3-202ENST00000339394 CD163Q86VB7 1156 aa19.91■□□□□ 0.78
SDC3-202ENST00000339394 C10orf67Q8IYJ2 551 aa19.91■□□□□ 0.78
SDC3-202ENST00000339394 OR10D3Q8NH80 312 aa19.91■□□□□ 0.78
SDC3-202ENST00000339394 OR2V1Q8NHB1 315 aa19.91■□□□□ 0.78
SDC3-202ENST00000339394 HS6ST2Q96MM7 605 aa19.91■□□□□ 0.78
SDC3-202ENST00000339394 COQ10BQ9H8M1 238 aa19.91■□□□□ 0.78
SDC3-202ENST00000339394 A0A087WUU8 490 aa19.91■□□□□ 0.78
SDC3-202ENST00000339394 TRBV4-1A0A0J9YWV2 114 aa19.91■□□□□ 0.78
SDC3-202ENST00000339394 H0Y3Z8 333 aa19.91■□□□□ 0.78
SDC3-202ENST00000339394 KPNA4O00629 521 aaPredicted RBP19.91■□□□□ 0.78
SDC3-202ENST00000339394 CARD18P57730 90 aa19.91■□□□□ 0.78
SDC3-202ENST00000339394 FGD3Q5JSP0 725 aa19.91■□□□□ 0.78
SDC3-202ENST00000339394 ZNF585AQ6P3V2 769 aa19.91■□□□□ 0.78
SDC3-202ENST00000339394 Q6ZPB1 254 aaPredicted RBP19.91■□□□□ 0.78
SDC3-202ENST00000339394 OSTF1Q92882 214 aa19.91■□□□□ 0.78
SDC3-202ENST00000339394 SLC19A3Q9BZV2 496 aa19.91■□□□□ 0.78
SDC3-202ENST00000339394 MEPEQ9NQ76 525 aaPredicted RBP19.91■□□□□ 0.78
SDC3-202ENST00000339394 PRRG2O14669 202 aa19.9■□□□□ 0.78
SDC3-202ENST00000339394 HNRNPRO43390 633 aaKnown RBP19.9■□□□□ 0.78
SDC3-202ENST00000339394 IMPDH2P12268 514 aa19.9■□□□□ 0.78
SDC3-202ENST00000339394 RPS5P46782 204 aaKnown RBP19.9■□□□□ 0.78
SDC3-202ENST00000339394 DIO1P49895 249 aa19.9■□□□□ 0.78
SDC3-202ENST00000339394 HMGA2P52926 109 aa19.9■□□□□ 0.78
SDC3-202ENST00000339394 UGT2B15P54855 530 aa19.9■□□□□ 0.78
SDC3-202ENST00000339394 RPS3AP61247 264 aaKnown RBP19.9■□□□□ 0.78
SDC3-202ENST00000339394 PPP1R8Q12972 351 aaKnown RBP19.9■□□□□ 0.78
SDC3-202ENST00000339394 MRPL49Q13405 166 aaKnown RBP19.9■□□□□ 0.78
SDC3-202ENST00000339394 ZFP1Q6P2D0 407 aa19.9■□□□□ 0.78
SDC3-202ENST00000339394 PODNL1Q6PEZ8 512 aa19.9■□□□□ 0.78
SDC3-202ENST00000339394 TBPL2Q6SJ96 375 aa19.9■□□□□ 0.78
SDC3-202ENST00000339394 C5orf46Q6UWT4 87 aa19.9■□□□□ 0.78
SDC3-202ENST00000339394 ZPLD1Q8TCW7 415 aa19.9■□□□□ 0.78
SDC3-202ENST00000339394 ACOT11Q8WXI4 607 aaPredicted RBP19.9■□□□□ 0.78
SDC3-202ENST00000339394 TAAR8Q969N4 342 aa19.9■□□□□ 0.78
SDC3-202ENST00000339394 ZNF845Q96IR2 970 aaPredicted RBP19.9■□□□□ 0.78
SDC3-202ENST00000339394 EPYCQ99645 322 aa19.9■□□□□ 0.78
SDC3-202ENST00000339394 TUBA1CQ9BQE3 449 aa19.9■□□□□ 0.78
SDC3-202ENST00000339394 FUZQ9BT04 418 aa19.9■□□□□ 0.78
SDC3-202ENST00000339394 PTDSS2Q9BVG9 487 aa19.9■□□□□ 0.78
SDC3-202ENST00000339394 VNN3Q9NY84 501 aa19.9■□□□□ 0.78
SDC3-202ENST00000339394 LYVE1Q9Y5Y7 322 aa19.9■□□□□ 0.78
SDC3-202ENST00000339394 U3KQV3 271 aa19.9■□□□□ 0.78
SDC3-202ENST00000339394 TRAV36DV7A0A075B6V5 113 aa19.89■□□□□ 0.77
SDC3-202ENST00000339394 AHRRA9YTQ3 701 aa19.89■□□□□ 0.77
SDC3-202ENST00000339394 SULT2B1O00204 365 aa19.89■□□□□ 0.77
SDC3-202ENST00000339394 TNFRSF11BO00300 401 aa19.89■□□□□ 0.77
SDC3-202ENST00000339394 SEC23BQ15437 767 aa19.89■□□□□ 0.77
SDC3-202ENST00000339394 SGCBQ16585 318 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms