RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 SORDQ00796 357 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 PRRT3Q5FWE3 981 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 EOGTQ5NDL2 527 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 DCST2Q5T1A1 773 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 ZNF563Q8TA94 476 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 PTP4A1Q93096 173 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 CLDND1Q9NY35 253 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 HEATR5BQ9P2D3 2071 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 A0A1W2PQU0 124 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 SERTM1A2A2V5 107 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 SGK494L7N484 410 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 UBL3O95164 117 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 SERPINA3P01011 423 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 ZNF35P13682 527 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 CFL1P23528 166 aaKnown RBP13.08□□□□□ -0.32
PCDH8-201ENST00000338862 SLC6A6P31641 620 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 COL28A1Q2UY09 1125 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 LEG1Q6P5S2 330 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 FOXRED2Q8IWF2 684 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 TTLQ8NG68 377 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 CCL4L1Q8NHW4 92 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 DUSP19Q8WTR2 217 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 CAPNS2Q96L46 248 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 LINC00052Q96N35 136 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 CNN2Q99439 309 aaKnown RBP13.08□□□□□ -0.32
PCDH8-201ENST00000338862 ZNF471Q9BX82 626 aaPredicted RBP13.08□□□□□ -0.32
PCDH8-201ENST00000338862 SDHAF2Q9NX18 166 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 IL20Q9NYY1 176 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 MED11Q9P086 117 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 KLHL9Q9P2J3 617 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 NLRC5Q86WI3 1866 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 PDCD5O14737 125 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 OLFM2O95897 454 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 CTSAP10619 480 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 HIST1H1CP16403 213 aaKnown RBP13.08□□□□□ -0.32
PCDH8-201ENST00000338862 VAMP1P23763 118 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 SLC22A10Q63ZE4 541 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 CNKSR3Q6P9H4 555 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 SLC35F2Q8IXU6 374 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 POGLUT1Q8NBL1 392 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 YIPF5Q969M3 257 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 CD93Q9NPY3 652 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 DLL4Q9NR61 685 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 FBXO9Q9UK97 447 aaPredicted RBP13.08□□□□□ -0.32
PCDH8-201ENST00000338862 RWDD3Q9Y3V2 267 aa13.08□□□□□ -0.32
PCDH8-201ENST00000338862 PLXND1Q9Y4D7 1925 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 RBBP9O75884 186 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 MPC2O95563 127 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 F3P13726 295 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 SIRPAP78324 504 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 SMAD2Q15796 467 aaKnown RBP13.07□□□□□ -0.32
PCDH8-201ENST00000338862 MFSD12Q6NUT3 480 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 KCTD9Q7L273 389 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 PRSS41Q7RTY9 318 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 ASPGQ86U10 573 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 COMMD2Q86X83 199 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 OR2L3Q8NG85 312 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 OR5M1Q8NGP8 315 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 ST8SIA4Q92187 359 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 NSMAFQ92636 917 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 ELF4Q99607 663 aaPredicted RBP13.07□□□□□ -0.32
PCDH8-201ENST00000338862 TMEM168Q9H0V1 697 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 KCNK15Q9H427 330 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 EMC7Q9NPA0 242 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 AKAP7Q9P0M2 348 aaPredicted RBP13.07□□□□□ -0.32
PCDH8-201ENST00000338862 CABIN1Q9Y6J0 2220 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 C13orf42A0A1B0GVH6 325 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 H0Y8X5 98 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 TPOP07202 933 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 IRF4Q15306 451 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 DECR1Q16698 335 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 DUSP6Q16828 381 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 PLA1AQ53H76 456 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 CD276Q5ZPR3 534 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 IDO2Q6ZQW0 420 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 BPHLQ86WA6 291 aaPredicted RBP13.07□□□□□ -0.32
PCDH8-201ENST00000338862 LIX1LQ8IVB5 337 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 LRRC3BQ96PB8 259 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 MS4A4EQ96PG1 132 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 GAL3ST4Q96RP7 486 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 MKKSQ9NPJ1 570 aaPredicted RBP13.07□□□□□ -0.32
PCDH8-201ENST00000338862 COMMD9Q9P000 198 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 RABL2BQ9UNT1 228 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 GPR34Q9UPC5 381 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 SLC35A3Q9Y2D2 325 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 ASB4Q9Y574 426 aa13.07□□□□□ -0.32
PCDH8-201ENST00000338862 ACSM4P0C7M7 580 aa13.06□□□□□ -0.32
PCDH8-201ENST00000338862 NFYAP23511 347 aaPredicted RBP13.06□□□□□ -0.32
PCDH8-201ENST00000338862 PSMD4P55036 377 aaKnown RBP13.06□□□□□ -0.32
PCDH8-201ENST00000338862 SKP1P63208 163 aa13.06□□□□□ -0.32
PCDH8-201ENST00000338862 PUDPQ08623 228 aa13.06□□□□□ -0.32
PCDH8-201ENST00000338862 RPE65Q16518 533 aa13.06□□□□□ -0.32
PCDH8-201ENST00000338862 GSG1Q2KHT4 349 aa13.06□□□□□ -0.32
PCDH8-201ENST00000338862 PAQR7Q86WK9 346 aa13.06□□□□□ -0.32
PCDH8-201ENST00000338862 GRAMD2AQ8IUY3 354 aa13.06□□□□□ -0.32
PCDH8-201ENST00000338862 PATE1Q8WXA2 126 aa13.06□□□□□ -0.32
PCDH8-201ENST00000338862 SMARCD2Q92925 531 aa13.06□□□□□ -0.32
PCDH8-201ENST00000338862 OR1F2PQ96R84 312 aa13.06□□□□□ -0.32
PCDH8-201ENST00000338862 SDF2Q99470 211 aa13.06□□□□□ -0.32
PCDH8-201ENST00000338862 ZFP64Q9NPA5 681 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms