RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 ZNF672Q499Z4 452 aaPredicted RBP11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 FBXW9Q5XUX1 488 aa11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 ABLIM2Q6H8Q1 611 aa11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 PRIMA1Q86XR5 153 aa11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 LRRC34Q8IZ02 419 aa11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 WDR60Q8WVS4 1066 aa11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 TLCD1Q96CP7 247 aa11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 ZBTB18Q99592 522 aa11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 TRIM2Q9C040 744 aa11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 ADAM19Q9H013 955 aa11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 ESRP2Q9H6T0 727 aaKnown RBP11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 EXOSC3Q9NQT5 275 aaKnown RBP11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 CISD1Q9NZ45 108 aaKnown RBP11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 TMEM181Q9P2C4 612 aa11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 GDF2Q9UK05 429 aaPredicted RBP11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 LIPT1Q9Y234 373 aa11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 HDGFL3Q9Y3E1 203 aa11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 CIB4A0PJX0 185 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 CCT8L1PA6NM43 557 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 TRPC5OSA6NMA1 111 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 INAFM1C9JVW0 142 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 RNF223E7ERA6 249 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 AKR7A3O95154 331 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 TFPTP0C1Z6 253 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 GGT1P19440 569 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 COX5AP20674 150 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 RPS4Y1P22090 263 aaKnown RBP11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 POLR2HP52434 150 aaKnown RBP11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 RPS4XP62701 263 aaKnown RBP11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 HPCAP84074 193 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 H3F3AP84243 136 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 HOXC5Q00444 222 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 SPOCK1Q08629 439 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 EPS8Q12929 822 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 CEACAM7Q14002 265 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 PDK3Q15120 406 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 PDCD4Q53EL6 469 aaKnown RBP11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 BEND6Q5SZJ8 279 aaPredicted RBP11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 ATG16L1Q676U5 607 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 ZNF836Q6ZNA1 936 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 CADM2Q8N3J6 435 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 TRIML2Q8N7C3 387 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 TMEM99Q8N816 258 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 ZIC4Q8N9L1 334 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 WDR31Q8NA23 367 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 OR52P1PQ8NH57 321 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 SLC25A43Q8WUT9 341 aaPredicted RBP11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 SLC38A5Q8WUX1 472 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 FBXW5Q969U6 566 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 MUCL1Q96DR8 90 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 MAELQ96JY0 434 aaKnown RBP11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 POTEKPQ9BYX7 375 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 CXorf56Q9H5V9 222 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 TPT1P8Q9HAU6 139 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 SLC7A10Q9NS82 523 aa11.77□□□□□ -0.53
NUDCD3-201ENST00000338427 DNHD1Q96M86 4753 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 CFAP73A6NFT4 308 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 OR5H1A6NKK0 313 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 KIAA1324LA8MWY0 1029 aaPredicted RBP11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 E7EQL1 145 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 ABCD4O14678 606 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 UBDO15205 165 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 FRS3O43559 492 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 MRPL33O75394 65 aaKnown RBP11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 KRT75O95678 551 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 BCHEP06276 602 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 DBIP07108 87 aaKnown RBP11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 ITGA5P08648 1049 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 ACVR1BP36896 505 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 SLC1A3P43003 542 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 POLR2JP52435 117 aaKnown RBP11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 LGALS3BPQ08380 585 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 GABRA6Q16445 453 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 CLEC12BQ2HXU8 276 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 TIMM23BQ5SRD1 257 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 TSPO2Q5TGU0 170 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 SLC2A7Q6PXP3 512 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 CROCCP2Q86T23 111 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 HTRA1Q92743 480 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 GTPBP3Q969Y2 492 aaKnown RBP11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 APH1AQ96BI3 265 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 ZNF385AQ96PM9 386 aaKnown RBP11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 PRR14Q9BWN1 585 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 NGBQ9NPG2 151 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 NKIRAS1Q9NYS0 192 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 SLAMF8Q9P0V8 285 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 TRAPPC4Q9Y296 219 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 FLVCR1Q9Y5Y0 555 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 SLC25A15Q9Y619 301 aa11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 SPIN1Q9Y657 262 aaPredicted RBP11.76□□□□□ -0.53
NUDCD3-201ENST00000338427 TLN2Q9Y4G6 2542 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 A0A1W2PP18 115 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 ANP32DO95626 131 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 IGHV4-39P01824 125 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 IL6P05231 212 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 IDO1P14902 403 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 MAGEA8P43361 318 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 CLK1P49759 484 aaKnown RBP11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 SLC16A1P53985 500 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 DSTNP60981 165 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms