RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 SLC35A1P78382 337 aa9.41□□□□□ -0.9
CAPN3-202ENST00000337571 CEP85LQ5SZL2 805 aa9.41□□□□□ -0.9
CAPN3-202ENST00000337571 AP1ARQ63HQ0 302 aa9.41□□□□□ -0.9
CAPN3-202ENST00000337571 FRRS1Q6ZNA5 592 aa9.41□□□□□ -0.9
CAPN3-202ENST00000337571 HMGN2P46Q86SG4 172 aa9.41□□□□□ -0.9
CAPN3-202ENST00000337571 RNF130Q86XS8 419 aa9.41□□□□□ -0.9
CAPN3-202ENST00000337571 ADGRG3Q86Y34 549 aa9.41□□□□□ -0.9
CAPN3-202ENST00000337571 ZNF433Q8N7K0 673 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-202ENST00000337571 FAM71CQ8NEG0 241 aa9.41□□□□□ -0.9
CAPN3-202ENST00000337571 OR52N5Q8NH56 324 aa9.41□□□□□ -0.9
CAPN3-202ENST00000337571 DNAJA3Q96EY1 480 aa9.41□□□□□ -0.9
CAPN3-202ENST00000337571 ADAD1Q96M93 576 aaKnown RBP9.41□□□□□ -0.9
CAPN3-202ENST00000337571 CCDC115Q96NT0 180 aa9.41□□□□□ -0.9
CAPN3-202ENST00000337571 TRIM2Q9C040 744 aa9.41□□□□□ -0.9
CAPN3-202ENST00000337571 C20orf27Q9GZN8 174 aa9.41□□□□□ -0.9
CAPN3-202ENST00000337571 MEAF6Q9HAF1 191 aa9.41□□□□□ -0.9
CAPN3-202ENST00000337571 CACYBPQ9HB71 228 aaKnown RBP9.41□□□□□ -0.9
CAPN3-202ENST00000337571 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.41□□□□□ -0.9
CAPN3-202ENST00000337571 TMED7Q9Y3B3 224 aa9.41□□□□□ -0.9
CAPN3-202ENST00000337571 V9GYY5 206 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-202ENST00000337571 CFAP73A6NFT4 308 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 TRPC5OSA6NMA1 111 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 HMGN4O00479 90 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 ZNF208O43345 1280 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 SSX4O60224 188 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 ANP32DO95626 131 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 KRT75O95678 551 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 PGRP06401 933 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 DBIP07108 87 aaKnown RBP9.4□□□□□ -0.9
CAPN3-202ENST00000337571 DHRS4L1P0CG22 281 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 BMP4P12644 408 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 CXCR1P25024 350 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 ACVR1BP36896 505 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 SLC1A3P43003 542 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 ZNF83P51522 516 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 UFM1P61960 85 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 TGFBR3Q03167 851 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 DMTNQ08495 405 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 SYPL1Q16563 259 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 NRF1Q16656 503 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 PGGHGQ32M88 737 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 ABLIM2Q6H8Q1 611 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 LRRC74BQ6ZQY2 392 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 ATG4DQ86TL0 474 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-202ENST00000337571 CCDC103Q8IW40 242 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 PEX5LQ8IYB4 626 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 FBXL14Q8N1E6 418 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 WDR60Q8WVS4 1066 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 CNOT9Q92600 299 aaKnown RBP9.4□□□□□ -0.9
CAPN3-202ENST00000337571 ARL5BQ96KC2 179 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 SORT1Q99523 831 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 RHNO1Q9BSD3 238 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 PARD6BQ9BYG5 372 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 GRIP2Q9C0E4 1043 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 OR11A1Q9GZK7 315 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 SLCO5A1Q9H2Y9 848 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 TAS2R16Q9NYV7 291 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 SLC9A8Q9Y2E8 581 aa9.4□□□□□ -0.9
CAPN3-202ENST00000337571 ABCA2Q9BZC7 2435 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 FAM234BA2RU67 622 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 TMEM247A6NEH6 219 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 AGAP5A6NIR3 686 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 CLDN24A6NM45 220 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 ZNF716A6NP11 495 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 SHISA9B4DS77 424 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 SLCO1B7G3V0H7 640 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 M0R1B8 84 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 RFXANKO14593 260 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 AP3D1O14617 1153 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 KRT33AO76009 404 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 IL6P05231 212 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 GSNP06396 782 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 EDNRAP25101 427 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 TACR3P29371 465 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 TTKP33981 857 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 FABP6P51161 128 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 SLC16A1P53985 500 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 COPZ1P61923 177 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 BST1Q10588 318 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 RAB35Q15286 201 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 GSTA3Q16772 222 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 NXNQ6DKJ4 435 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 TMEM225Q6GV28 225 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 OGFOD2Q6N063 350 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 CASP12Q6UXS9 341 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 PRIMA1Q86XR5 153 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 ZNF440Q8IYI8 595 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 ANKFN1Q8N957 763 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 ANKRD42Q8N9B4 389 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 ZNF511Q8NB15 262 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 GLB1L3Q8NCI6 653 aaPredicted RBP9.39□□□□□ -0.91
CAPN3-202ENST00000337571 MAPK1IP1LQ8NDC0 245 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 MUS81Q96NY9 551 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 DHRS9Q9BPW9 319 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 INPP5KQ9BT40 448 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 TRAF4Q9BUZ4 470 aaPredicted RBP9.39□□□□□ -0.91
CAPN3-202ENST00000337571 ARMC7Q9H6L4 198 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 FKRPQ9H9S5 495 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 AIG1Q9NVV5 245 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 THAP1Q9NVV9 213 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms