RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 NEU3Q9UQ49 428 aa8□□□□□ -1.13
TDP1-201ENST00000335725 PCYT1BQ9Y5K3 369 aaPredicted RBP8□□□□□ -1.13
TDP1-201ENST00000335725 SLIT2O94813 1529 aa8□□□□□ -1.13
TDP1-201ENST00000335725 A0A0A6YYH2 397 aa8□□□□□ -1.13
TDP1-201ENST00000335725 A6NJ64 397 aa8□□□□□ -1.13
TDP1-201ENST00000335725 M0R036 132 aa8□□□□□ -1.13
TDP1-201ENST00000335725 IFNA21P01568 189 aa8□□□□□ -1.13
TDP1-201ENST00000335725 ANKRD34CP0C6C1 535 aa8□□□□□ -1.13
TDP1-201ENST00000335725 IRS1P35568 1242 aa8□□□□□ -1.13
TDP1-201ENST00000335725 TAS2R39P59534 338 aa8□□□□□ -1.13
TDP1-201ENST00000335725 SCGB2A2Q13296 93 aa8□□□□□ -1.13
TDP1-201ENST00000335725 SLC9A3R2Q15599 337 aa8□□□□□ -1.13
TDP1-201ENST00000335725 HBMQ6B0K9 141 aa8□□□□□ -1.13
TDP1-201ENST00000335725 OVOS1Q6IE37 1185 aa8□□□□□ -1.13
TDP1-201ENST00000335725 CD200R1LQ6Q8B3 271 aa8□□□□□ -1.13
TDP1-201ENST00000335725 METTL7BQ6UX53 244 aa8□□□□□ -1.13
TDP1-201ENST00000335725 C11orf42Q8N5U0 333 aa8□□□□□ -1.13
TDP1-201ENST00000335725 HJURPQ8NCD3 748 aaPredicted RBP8□□□□□ -1.13
TDP1-201ENST00000335725 SHDQ96IW2 340 aa8□□□□□ -1.13
TDP1-201ENST00000335725 FEVQ99581 238 aa8□□□□□ -1.13
TDP1-201ENST00000335725 TMEM231Q9H6L2 316 aa8□□□□□ -1.13
TDP1-201ENST00000335725 FN3KRPQ9HA64 309 aa8□□□□□ -1.13
TDP1-201ENST00000335725 MEPEQ9NQ76 525 aaPredicted RBP8□□□□□ -1.13
TDP1-201ENST00000335725 CLEC5AQ9NY25 188 aa8□□□□□ -1.13
TDP1-201ENST00000335725 ADAM18Q9Y3Q7 739 aa8□□□□□ -1.13
TDP1-201ENST00000335725 RGPD2P0DJD1 1756 aa8□□□□□ -1.13
TDP1-201ENST00000335725 PAPPAQ13219 1627 aa8□□□□□ -1.13
TDP1-201ENST00000335725 TNFRSF11BO00300 401 aa8□□□□□ -1.13
TDP1-201ENST00000335725 MED7O43513 233 aa8□□□□□ -1.13
TDP1-201ENST00000335725 MELTFP08582 738 aa8□□□□□ -1.13
TDP1-201ENST00000335725 CST2P09228 141 aa8□□□□□ -1.13
TDP1-201ENST00000335725 NBEAP1P0C6P0 100 aa8□□□□□ -1.13
TDP1-201ENST00000335725 TFPIP10646 304 aa8□□□□□ -1.13
TDP1-201ENST00000335725 GPD1P21695 349 aa8□□□□□ -1.13
TDP1-201ENST00000335725 TPI1P60174 286 aa8□□□□□ -1.13
TDP1-201ENST00000335725 RPS25P62851 125 aaKnown RBP8□□□□□ -1.13
TDP1-201ENST00000335725 ITPK1Q13572 414 aa8□□□□□ -1.13
TDP1-201ENST00000335725 ZNF460Q14592 562 aa8□□□□□ -1.13
TDP1-201ENST00000335725 GINS1Q14691 196 aa8□□□□□ -1.13
TDP1-201ENST00000335725 ELAVL1Q15717 326 aaKnown RBP8□□□□□ -1.13
TDP1-201ENST00000335725 GOLGA7BQ2TAP0 167 aa8□□□□□ -1.13
TDP1-201ENST00000335725 ZNF697Q5TEC3 545 aa8□□□□□ -1.13
TDP1-201ENST00000335725 KCTD9Q7L273 389 aa8□□□□□ -1.13
TDP1-201ENST00000335725 SERPINA11Q86U17 422 aa8□□□□□ -1.13
TDP1-201ENST00000335725 VRK2Q86Y07 508 aa8□□□□□ -1.13
TDP1-201ENST00000335725 MARCH9Q86YJ5 346 aa8□□□□□ -1.13
TDP1-201ENST00000335725 OR11G2Q8NGC1 345 aa8□□□□□ -1.13
TDP1-201ENST00000335725 OR2V1Q8NHB1 315 aa8□□□□□ -1.13
TDP1-201ENST00000335725 ISOC2Q96AB3 205 aa8□□□□□ -1.13
TDP1-201ENST00000335725 PRRT1Q99946 306 aa8□□□□□ -1.13
TDP1-201ENST00000335725 SULT4A1Q9BR01 284 aa8□□□□□ -1.13
TDP1-201ENST00000335725 MRPL45Q9BRJ2 306 aaKnown RBP8□□□□□ -1.13
TDP1-201ENST00000335725 PDE7BQ9NP56 450 aa8□□□□□ -1.13
TDP1-201ENST00000335725 CACFD1Q9UGQ2 172 aa8□□□□□ -1.13
TDP1-201ENST00000335725 PTGDR2Q9Y5Y4 395 aa8□□□□□ -1.13
TDP1-201ENST00000335725 ZFP37Q9Y6Q3 630 aaPredicted RBP8□□□□□ -1.13
TDP1-201ENST00000335725 GABRR3A8MPY1 467 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 ZNF705GA8MUZ8 300 aaPredicted RBP7.99□□□□□ -1.13
TDP1-201ENST00000335725 G3V3G9 751 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 WNT9AO14904 365 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 FLRT2O43155 660 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 RAB36O95755 333 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 OR5AC1P0C628 307 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 TLX1P31314 330 aaPredicted RBP7.99□□□□□ -1.13
TDP1-201ENST00000335725 MTNR1BP49286 362 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 GTF2A2P52657 109 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 SNRPGP62308 76 aaKnown RBP7.99□□□□□ -1.13
TDP1-201ENST00000335725 RFTN2Q52LD8 501 aaPredicted RBP7.99□□□□□ -1.13
TDP1-201ENST00000335725 ZNF311Q5JNZ3 666 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 KHDRBS2Q5VWX1 349 aaKnown RBP7.99□□□□□ -1.13
TDP1-201ENST00000335725 TSSK4Q6SA08 328 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 NHLRC1Q6VVB1 395 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 C15orf39Q6ZRI6 1047 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 SLC30A8Q8IWU4 369 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 C12orf76Q8N812 135 aaPredicted RBP7.99□□□□□ -1.13
TDP1-201ENST00000335725 SAMD12Q8N8I0 201 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 OR4A4PQ8NGN8 299 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 SCLYQ96I15 445 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 WDR92Q96MX6 357 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 SLC22A12Q96S37 553 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 TUBB1Q9H4B7 451 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 CBLN4Q9NTU7 201 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 TMEM100Q9NV29 134 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 LRFN1Q9P244 771 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 CDV3Q9UKY7 258 aaKnown RBP7.99□□□□□ -1.13
TDP1-201ENST00000335725 PPT2Q9UMR5 302 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 PCDHB11Q9Y5F2 797 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 GSTZ1O43708 216 aaPredicted RBP7.99□□□□□ -1.13
TDP1-201ENST00000335725 DIRAS1O95057 198 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 LRG1P02750 347 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 TPT1P13693 172 aaKnown RBP7.99□□□□□ -1.13
TDP1-201ENST00000335725 IRF2P14316 349 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 HLA-GP17693 338 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 CYP2F1P24903 491 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 BCAMP50895 628 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 CRYBB1P53674 252 aaPredicted RBP7.99□□□□□ -1.13
TDP1-201ENST00000335725 KLF9Q13886 244 aaPredicted RBP7.99□□□□□ -1.13
TDP1-201ENST00000335725 AWAT1Q58HT5 328 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 C18orf63Q68DL7 685 aa7.99□□□□□ -1.13
TDP1-201ENST00000335725 HEPN1Q6WQI6 88 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms