RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 ANKRD61A6NGH8 418 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZFP92A6NM28 416 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 HAS3O00219 553 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 HSD17B6O14756 317 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 HPP00738 406 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 EPOP01588 193 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 FCER1GP30273 86 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 WASP42768 502 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 RPS18P62269 152 aaKnown RBP5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 FABP9Q0Z7S8 132 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 ARFRP1Q13795 201 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 RPE65Q16518 533 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 PGGHGQ32M88 737 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 XKR4Q5GH76 650 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 UBE2NLQ5JXB2 153 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZNF470Q6ECI4 717 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 RANBP10Q6VN20 620 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 MARCH9Q86YJ5 346 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 SH3RF2Q8TEC5 729 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 PYCR2Q96C36 320 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 ACTR3CQ9C0K3 210 aaPredicted RBP5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 MTHFD2LQ9H903 347 aaPredicted RBP5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 CYSLTR1Q9Y271 337 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 TP53TG5Q9Y2B4 290 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 TLX2O43763 284 aaPredicted RBP5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 GADD45GO95257 159 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZNF728P0DKX0 622 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 RFTN1Q14699 578 aaPredicted RBP5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 C16orf46Q6P387 395 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 TSSK4Q6SA08 328 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 UBE3DQ7Z6J8 389 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 SFXN5Q8TD22 340 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 RNF125Q96EQ8 232 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 TSSK2Q96PF2 358 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 PIGVQ9NUD9 493 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 TMX2Q9Y320 296 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 RFXANKO14593 260 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 RGS13O14921 159 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 SLC25A4P12235 298 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 RABGGTBP53611 331 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 NFATC3Q12968 1075 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 SMTNL2Q2TAL5 461 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 AADACL2Q6P093 401 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 MON1BQ7L1V2 547 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR4K13Q8NH42 304 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 ACTL9Q8TC94 416 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZFYVE21Q9BQ24 234 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 GINS3Q9BRX5 216 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 TMEM191AQ9H0A3 160 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZNF446Q9NWS9 450 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 FLRT3Q9NZU0 649 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 USP3Q9Y6I4 520 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 CNTNAP1P78357 1384 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 DOPEY2Q9Y3R5 2298 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 PGPEP1LA6NFU8 196 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 GOSR1O95249 250 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 CLIC3O95833 236 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 GLB1P16278 677 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 RBM39Q14498 530 aaKnown RBP5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 CTF1Q16619 201 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 PRTGQ2VWP7 1150 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 C1orf185Q5T7R7 199 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 TMEM236Q5W0B7 351 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR2C3Q8N628 320 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR8J1Q8NGP2 316 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 GCDHQ92947 438 aaPredicted RBP5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 FUCA2Q9BTY2 467 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 NWD1Q149M9 1564 aa5.71□□□□□ -1.5
CDC42BPA-201ENST00000334218 PLSCR5A0PG75 271 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 POM121CA8CG34 1229 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 CBX4O00257 560 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 SLC1A7O00341 560 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 ISLRO14498 428 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 S100A4P26447 101 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 TSGA10IPQ3SY00 556 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 CELF5Q8N6W0 485 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 MRPL24Q96A35 216 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 B3GALT5Q9Y2C3 310 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 ANK1P16157 1881 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 FREM3P0C091 2139 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 LYRM1O43325 122 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 GLCEO94923 617 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 ELLP55199 621 aaPredicted RBP5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 GCSAMLQ5JQS6 135 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 LRRN4CLQ8ND94 238 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR1F2PQ96R84 312 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 YAE1D1Q9NRH1 226 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 ERVW-1Q9UQF0 538 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 A0A0J9YYE9 177 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZIC2O95409 532 aaPredicted RBP5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 TRBC1P01850 177 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 VTNP04004 478 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 LAMP1P11279 417 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 OTX1P32242 354 aaPredicted RBP5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 KCNC1P48547 511 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 MARCKSL1P49006 195 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 SRSF6Q13247 344 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 BLIDQ8IZY5 108 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR8J3Q8NGG0 315 aa5.7□□□□□ -1.5
CDC42BPA-201ENST00000334218 MS4A10Q96PG2 267 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms