RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 HTR3AP46098 478 aa12.93□□□□□ -0.34
PPP1CA-201ENST00000312989 PRRC2AP48634 2157 aaKnown RBP12.93□□□□□ -0.34
PPP1CA-201ENST00000312989 CSNK2A1P68400 391 aaPredicted RBP12.93□□□□□ -0.34
PPP1CA-201ENST00000312989 GNA13Q14344 377 aa12.93□□□□□ -0.34
PPP1CA-201ENST00000312989 GLIPR1L2Q4G1C9 344 aa12.93□□□□□ -0.34
PPP1CA-201ENST00000312989 RUNDC3AQ59EK9 446 aa12.93□□□□□ -0.34
PPP1CA-201ENST00000312989 SFRP5Q5T4F7 317 aa12.93□□□□□ -0.34
PPP1CA-201ENST00000312989 CCDC103Q8IW40 242 aa12.93□□□□□ -0.34
PPP1CA-201ENST00000312989 NFKBIDQ8NI38 313 aa12.93□□□□□ -0.34
PPP1CA-201ENST00000312989 BBS10Q8TAM1 723 aa12.93□□□□□ -0.34
PPP1CA-201ENST00000312989 C3orf49Q96BT1 292 aa12.93□□□□□ -0.34
PPP1CA-201ENST00000312989 S100PBPQ96BU1 408 aa12.93□□□□□ -0.34
PPP1CA-201ENST00000312989 ZNF775Q96BV0 537 aaPredicted RBP12.93□□□□□ -0.34
PPP1CA-201ENST00000312989 ZC3HAV1LQ96H79 300 aaKnown RBP12.93□□□□□ -0.34
PPP1CA-201ENST00000312989 REXO5Q96IC2 774 aaKnown RBP12.93□□□□□ -0.34
PPP1CA-201ENST00000312989 ALPK1Q96QP1 1244 aa12.93□□□□□ -0.34
PPP1CA-201ENST00000312989 TACO1Q9BSH4 297 aaKnown RBP12.93□□□□□ -0.34
PPP1CA-201ENST00000312989 TMEM38AQ9H6F2 299 aa12.93□□□□□ -0.34
PPP1CA-201ENST00000312989 ZNF226Q9NYT6 803 aa12.93□□□□□ -0.34
PPP1CA-201ENST00000312989 TRAPPC4Q9Y296 219 aa12.93□□□□□ -0.34
PPP1CA-201ENST00000312989 SPIN1Q9Y657 262 aaPredicted RBP12.93□□□□□ -0.34
PPP1CA-201ENST00000312989 MAP1AP78559 2803 aaPredicted RBP12.92□□□□□ -0.34
PPP1CA-201ENST00000312989 ITPR3Q14573 2671 aa12.92□□□□□ -0.34
PPP1CA-201ENST00000312989 TPST1O60507 370 aa12.92□□□□□ -0.34
PPP1CA-201ENST00000312989 TFPIP10646 304 aa12.92□□□□□ -0.34
PPP1CA-201ENST00000312989 ETS2P15036 469 aa12.92□□□□□ -0.34
PPP1CA-201ENST00000312989 PPP3CBP16298 524 aa12.92□□□□□ -0.34
PPP1CA-201ENST00000312989 FKBP2P26885 142 aaKnown RBP12.92□□□□□ -0.34
PPP1CA-201ENST00000312989 HTR2AP28223 471 aa12.92□□□□□ -0.34
PPP1CA-201ENST00000312989 HOXC5Q00444 222 aa12.92□□□□□ -0.34
PPP1CA-201ENST00000312989 GCNT6Q5T4J0 391 aa12.92□□□□□ -0.34
PPP1CA-201ENST00000312989 Q6ZT83 130 aa12.92□□□□□ -0.34
PPP1CA-201ENST00000312989 ATG4DQ86TL0 474 aaPredicted RBP12.92□□□□□ -0.34
PPP1CA-201ENST00000312989 ZNF440Q8IYI8 595 aa12.92□□□□□ -0.34
PPP1CA-201ENST00000312989 SLC35B4Q969S0 331 aa12.92□□□□□ -0.34
PPP1CA-201ENST00000312989 PIK3IP1Q96FE7 263 aa12.92□□□□□ -0.34
PPP1CA-201ENST00000312989 SIKE1Q9BRV8 207 aa12.92□□□□□ -0.34
PPP1CA-201ENST00000312989 PTDSS2Q9BVG9 487 aa12.92□□□□□ -0.34
PPP1CA-201ENST00000312989 RAD21L1Q9H4I0 556 aa12.92□□□□□ -0.34
PPP1CA-201ENST00000312989 TMEM181Q9P2C4 612 aa12.92□□□□□ -0.34
PPP1CA-201ENST00000312989 PRDM4Q9UKN5 801 aa12.92□□□□□ -0.34
PPP1CA-201ENST00000312989 LIPT2A6NK58 231 aa12.91□□□□□ -0.34
PPP1CA-201ENST00000312989 PDLIM1O00151 329 aa12.91□□□□□ -0.34
PPP1CA-201ENST00000312989 FXYD1O00168 92 aa12.91□□□□□ -0.34
PPP1CA-201ENST00000312989 FBP2O00757 339 aa12.91□□□□□ -0.34
PPP1CA-201ENST00000312989 CASKO14936 926 aa12.91□□□□□ -0.34
PPP1CA-201ENST00000312989 ADAP00813 363 aa12.91□□□□□ -0.34
PPP1CA-201ENST00000312989 IGHV1-2P23083 117 aa12.91□□□□□ -0.34
PPP1CA-201ENST00000312989 PRKAR1BP31321 381 aa12.91□□□□□ -0.34
PPP1CA-201ENST00000312989 GZMMP51124 257 aa12.91□□□□□ -0.34
PPP1CA-201ENST00000312989 MAP2K6P52564 334 aa12.91□□□□□ -0.34
PPP1CA-201ENST00000312989 FOXG1P55316 489 aaPredicted RBP12.91□□□□□ -0.34
PPP1CA-201ENST00000312989 PCBP3P57721 371 aaKnown RBP12.91□□□□□ -0.34
PPP1CA-201ENST00000312989 EGR4Q05215 589 aa12.91□□□□□ -0.34
PPP1CA-201ENST00000312989 BNIP2Q12982 314 aa12.91□□□□□ -0.34
PPP1CA-201ENST00000312989 DEFB113Q30KQ7 82 aa12.91□□□□□ -0.34
PPP1CA-201ENST00000312989 ZNF311Q5JNZ3 666 aa12.91□□□□□ -0.34
PPP1CA-201ENST00000312989 WBP2NLQ6ICG8 309 aa12.91□□□□□ -0.34
PPP1CA-201ENST00000312989 DHRS4L2Q6PKH6 230 aa12.91□□□□□ -0.34
PPP1CA-201ENST00000312989 C6orf89Q6UWU4 347 aa12.91□□□□□ -0.34
PPP1CA-201ENST00000312989 STK32CQ86UX6 486 aa12.91□□□□□ -0.34
PPP1CA-201ENST00000312989 ZIC4Q8N9L1 334 aa12.91□□□□□ -0.34
PPP1CA-201ENST00000312989 ANKRD27Q96NW4 1050 aa12.91□□□□□ -0.34
PPP1CA-201ENST00000312989 TMUB1Q9BVT8 246 aa12.91□□□□□ -0.34
PPP1CA-201ENST00000312989 TMEM120AQ9BXJ8 343 aa12.91□□□□□ -0.34
PPP1CA-201ENST00000312989 POTEKPQ9BYX7 375 aa12.91□□□□□ -0.34
PPP1CA-201ENST00000312989 IFT52Q9Y366 437 aa12.91□□□□□ -0.34
PPP1CA-201ENST00000312989 RAI1Q7Z5J4 1906 aaPredicted RBP12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 NF1P21359 2839 aa12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 ZFHX3Q15911 3703 aa12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 A0A0G2JND7 137 aa12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 FTCDNL1E5RQL4 147 aa12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 TPST2O60704 377 aa12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 PLAUP00749 431 aa12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 NCF2P19878 526 aaPredicted RBP12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 FPR1P21462 350 aa12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 CRYBA2P53672 197 aa12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 CDK6Q00534 326 aa12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 ITGADQ13349 1161 aa12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 SLC17A1Q14916 467 aa12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 LARS2Q15031 903 aaKnown RBP12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 P2RY6Q15077 328 aa12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 TAB1Q15750 504 aa12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 ZSWIM7Q19AV6 140 aa12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 METTL21CQ5VZV1 264 aa12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 NET1Q7Z628 596 aaPredicted RBP12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 GALNT5Q7Z7M9 940 aa12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 DHDDSQ86SQ9 333 aa12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 TSPEARQ8WU66 669 aa12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 RABEP2Q9H5N1 569 aa12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 CCDC134Q9H6E4 229 aa12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 DLL4Q9NR61 685 aa12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 FGFR1OP2Q9NVK5 253 aa12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 LEF1Q9UJU2 399 aaPredicted RBP12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 FLVCR1Q9Y5Y0 555 aa12.9□□□□□ -0.34
PPP1CA-201ENST00000312989 MTORP42345 2549 aa12.89□□□□□ -0.35
PPP1CA-201ENST00000312989 IGKV1D-42A0A075B6H8 117 aa12.89□□□□□ -0.35
PPP1CA-201ENST00000312989 CNOT4O95628 575 aaKnown RBP12.89□□□□□ -0.35
PPP1CA-201ENST00000312989 PPIBP23284 216 aaKnown RBP12.89□□□□□ -0.35
PPP1CA-201ENST00000312989 DNASE1P24855 282 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms