RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 TRAPPC13A5PLN9 417 aa16.38■□□□□ 0.21
HMGA1-201ENST00000311487 ELOA3DA6NLF2 546 aaPredicted RBP16.38■□□□□ 0.21
HMGA1-201ENST00000311487 SUSD5O60279 629 aa16.38■□□□□ 0.21
HMGA1-201ENST00000311487 SMIM18P0DKX4 95 aa16.38■□□□□ 0.21
HMGA1-201ENST00000311487 TFPIP10646 304 aa16.38■□□□□ 0.21
HMGA1-201ENST00000311487 CBLP22681 906 aa16.38■□□□□ 0.21
HMGA1-201ENST00000311487 POLR2HP52434 150 aaKnown RBP16.38■□□□□ 0.21
HMGA1-201ENST00000311487 INAQ16352 499 aa16.38■□□□□ 0.21
HMGA1-201ENST00000311487 TMEM44Q2T9K0 475 aa16.38■□□□□ 0.21
HMGA1-201ENST00000311487 ELOA3BQ3SY89 546 aa16.38■□□□□ 0.21
HMGA1-201ENST00000311487 SOWAHCQ53LP3 525 aaPredicted RBP16.38■□□□□ 0.21
HMGA1-201ENST00000311487 ULK3Q6PHR2 472 aa16.38■□□□□ 0.21
HMGA1-201ENST00000311487 C3P1Q6ZMU1 363 aa16.38■□□□□ 0.21
HMGA1-201ENST00000311487 FGD2Q7Z6J4 655 aa16.38■□□□□ 0.21
HMGA1-201ENST00000311487 ATG4DQ86TL0 474 aaPredicted RBP16.38■□□□□ 0.21
HMGA1-201ENST00000311487 ELOA3Q8NG57 546 aa16.38■□□□□ 0.21
HMGA1-201ENST00000311487 TFAP2CQ92754 450 aa16.38■□□□□ 0.21
HMGA1-201ENST00000311487 ABTB1Q969K4 478 aaPredicted RBP16.38■□□□□ 0.21
HMGA1-201ENST00000311487 ARL5BQ96KC2 179 aa16.38■□□□□ 0.21
HMGA1-201ENST00000311487 MRGPRX4Q96LA9 322 aa16.38■□□□□ 0.21
HMGA1-201ENST00000311487 PRRC1Q96M27 445 aa16.38■□□□□ 0.21
HMGA1-201ENST00000311487 ANKRD60Q9BZ19 345 aa16.38■□□□□ 0.21
HMGA1-201ENST00000311487 MAGIXQ9H6Y5 334 aa16.38■□□□□ 0.21
HMGA1-201ENST00000311487 MAN2C1Q9NTJ4 1040 aa16.38■□□□□ 0.21
HMGA1-201ENST00000311487 SELENONQ9NZV5 590 aa16.38■□□□□ 0.21
HMGA1-201ENST00000311487 A0A087WZY1 265 aa16.37■□□□□ 0.21
HMGA1-201ENST00000311487 LYPD3O95274 346 aa16.37■□□□□ 0.21
HMGA1-201ENST00000311487 ZNF23P17027 643 aa16.37■□□□□ 0.21
HMGA1-201ENST00000311487 POU3F2P20265 443 aaPredicted RBP16.37■□□□□ 0.21
HMGA1-201ENST00000311487 TDGF1P3P51864 188 aa16.37■□□□□ 0.21
HMGA1-201ENST00000311487 FGD3Q5JSP0 725 aa16.37■□□□□ 0.21
HMGA1-201ENST00000311487 ZGRF1Q86YA3 2104 aa16.37■□□□□ 0.21
HMGA1-201ENST00000311487 SLC35B4Q969S0 331 aa16.37■□□□□ 0.21
HMGA1-201ENST00000311487 GPR137Q96N19 417 aa16.37■□□□□ 0.21
HMGA1-201ENST00000311487 TIMP4Q99727 224 aa16.37■□□□□ 0.21
HMGA1-201ENST00000311487 PIP5K1AQ99755 562 aa16.37■□□□□ 0.21
HMGA1-201ENST00000311487 ZNF696Q9H7X3 374 aa16.37■□□□□ 0.21
HMGA1-201ENST00000311487 CHRNA9Q9UGM1 479 aa16.37■□□□□ 0.21
HMGA1-201ENST00000311487 SH3BGRL2Q9UJC5 107 aa16.37■□□□□ 0.21
HMGA1-201ENST00000311487 MPDZO75970 2070 aa16.37■□□□□ 0.21
HMGA1-201ENST00000311487 TRBV4-1A0A0J9YWV2 114 aa16.37■□□□□ 0.21
HMGA1-201ENST00000311487 LRRN3E7EW58 273 aa16.37■□□□□ 0.21
HMGA1-201ENST00000311487 TNFSF11O14788 317 aa16.37■□□□□ 0.21
HMGA1-201ENST00000311487 TNFAIP8O95379 198 aa16.37■□□□□ 0.21
HMGA1-201ENST00000311487 CST1P01037 141 aa16.37■□□□□ 0.21
HMGA1-201ENST00000311487 RHCEP18577 417 aa16.37■□□□□ 0.21
HMGA1-201ENST00000311487 CLDN15P56746 228 aa16.37■□□□□ 0.21
HMGA1-201ENST00000311487 IGFBP7Q16270 282 aa16.37■□□□□ 0.21
HMGA1-201ENST00000311487 PFN4Q8NHR9 129 aa16.37■□□□□ 0.21
HMGA1-201ENST00000311487 POP5Q969H6 163 aaKnown RBP16.37■□□□□ 0.21
HMGA1-201ENST00000311487 PRSS27Q9BQR3 290 aa16.37■□□□□ 0.21
HMGA1-201ENST00000311487 QPCTLQ9NXS2 382 aa16.37■□□□□ 0.21
HMGA1-201ENST00000311487 ACAD8Q9UKU7 415 aa16.37■□□□□ 0.21
HMGA1-201ENST00000311487 PYCARD-AS1I3L0S3 204 aa16.36■□□□□ 0.21
HMGA1-201ENST00000311487 FAAHO00519 579 aa16.36■□□□□ 0.21
HMGA1-201ENST00000311487 EIF1AYO14602 144 aaKnown RBP16.36■□□□□ 0.21
HMGA1-201ENST00000311487 PIP5K1CO60331 668 aa16.36■□□□□ 0.21
HMGA1-201ENST00000311487 FMO6PO60774 539 aa16.36■□□□□ 0.21
HMGA1-201ENST00000311487 C1QL1O75973 258 aa16.36■□□□□ 0.21
HMGA1-201ENST00000311487 APOBEC1P41238 236 aaKnown RBP16.36■□□□□ 0.21
HMGA1-201ENST00000311487 EIF1P41567 113 aaKnown RBP16.36■□□□□ 0.21
HMGA1-201ENST00000311487 RPS5P46782 204 aaKnown RBP16.36■□□□□ 0.21
HMGA1-201ENST00000311487 EGR4Q05215 589 aa16.36■□□□□ 0.21
HMGA1-201ENST00000311487 C11orf91Q3C1V1 193 aa16.36■□□□□ 0.21
HMGA1-201ENST00000311487 ZNF613Q6PF04 617 aa16.36■□□□□ 0.21
HMGA1-201ENST00000311487 GFRALQ6UXV0 394 aa16.36■□□□□ 0.21
HMGA1-201ENST00000311487 CYP4Z1Q86W10 505 aa16.36■□□□□ 0.21
HMGA1-201ENST00000311487 SLC38A4Q969I6 547 aa16.36■□□□□ 0.21
HMGA1-201ENST00000311487 KTI12Q96EK9 354 aaPredicted RBP16.36■□□□□ 0.21
HMGA1-201ENST00000311487 OR5B2Q96R09 309 aa16.36■□□□□ 0.21
HMGA1-201ENST00000311487 SLX1AQ9BQ83 275 aa16.36■□□□□ 0.21
HMGA1-201ENST00000311487 ADI1Q9BV57 179 aa16.36■□□□□ 0.21
HMGA1-201ENST00000311487 DNAJB9Q9UBS3 223 aa16.36■□□□□ 0.21
HMGA1-201ENST00000311487 IGKV1D-42A0A075B6H8 117 aa16.35■□□□□ 0.21
HMGA1-201ENST00000311487 KDM4EB2RXH2 506 aaPredicted RBP16.35■□□□□ 0.21
HMGA1-201ENST00000311487 GNGT2O14610 69 aa16.35■□□□□ 0.21
HMGA1-201ENST00000311487 IGHG3P01860 377 aa16.35■□□□□ 0.21
HMGA1-201ENST00000311487 ITGA2P17301 1181 aa16.35■□□□□ 0.21
HMGA1-201ENST00000311487 KLK2P20151 261 aa16.35■□□□□ 0.21
HMGA1-201ENST00000311487 MAGEA2P43356 314 aa16.35■□□□□ 0.21
HMGA1-201ENST00000311487 LHX2P50458 406 aa16.35■□□□□ 0.21
HMGA1-201ENST00000311487 GTF3C1Q12789 2109 aa16.35■□□□□ 0.21
HMGA1-201ENST00000311487 SEC23BQ15437 767 aa16.35■□□□□ 0.21
HMGA1-201ENST00000311487 SLC25A53Q5H9E4 307 aa16.35■□□□□ 0.21
HMGA1-201ENST00000311487 ZNF843Q8N446 348 aa16.35■□□□□ 0.21
HMGA1-201ENST00000311487 MAGEE2Q8TD90 523 aaPredicted RBP16.35■□□□□ 0.21
HMGA1-201ENST00000311487 DNAJA4Q8WW22 397 aaPredicted RBP16.35■□□□□ 0.21
HMGA1-201ENST00000311487 BARD1Q99728 777 aaKnown RBP16.35■□□□□ 0.21
HMGA1-201ENST00000311487 CAMK2AQ9UQM7 478 aa16.35■□□□□ 0.21
HMGA1-201ENST00000311487 MRPS18CQ9Y3D5 142 aaKnown RBP16.35■□□□□ 0.21
HMGA1-201ENST00000311487 MAGED1Q9Y5V3 778 aaPredicted RBP16.35■□□□□ 0.21
HMGA1-201ENST00000311487 CHP2O43745 196 aa16.35■□□□□ 0.21
HMGA1-201ENST00000311487 OR5F1O95221 314 aa16.35■□□□□ 0.21
HMGA1-201ENST00000311487 GADD45GO95257 159 aa16.35■□□□□ 0.21
HMGA1-201ENST00000311487 H1F0P07305 194 aaKnown RBP16.35■□□□□ 0.21
HMGA1-201ENST00000311487 CRYZQ08257 329 aaKnown RBP16.35■□□□□ 0.21
HMGA1-201ENST00000311487 SLC36A3Q495N2 470 aa16.35■□□□□ 0.21
HMGA1-201ENST00000311487 FOXB2Q5VYV0 432 aa16.35■□□□□ 0.21
HMGA1-201ENST00000311487 VASNQ6EMK4 673 aa16.35■□□□□ 0.21
HMGA1-201ENST00000311487 TMEM179BQ7Z7N9 219 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms