RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 HNRNPCL3B7ZW38 293 aa15.09■□□□□ 0.01
HMGCLL1-202ENST00000308161 CLOCKO15516 846 aa15.09■□□□□ 0.01
HMGCLL1-202ENST00000308161 HNRNPCL1O60812 293 aaKnown RBP15.09■□□□□ 0.01
HMGCLL1-202ENST00000308161 RAMP1O60894 148 aa15.09■□□□□ 0.01
HMGCLL1-202ENST00000308161 HNRNPCL4P0DMR1 293 aa15.09■□□□□ 0.01
HMGCLL1-202ENST00000308161 PRG2P13727 222 aa15.09■□□□□ 0.01
HMGCLL1-202ENST00000308161 CXCR1P25024 350 aa15.09■□□□□ 0.01
HMGCLL1-202ENST00000308161 FKBP2P26885 142 aaKnown RBP15.09■□□□□ 0.01
HMGCLL1-202ENST00000308161 CLK1P49759 484 aaKnown RBP15.09■□□□□ 0.01
HMGCLL1-202ENST00000308161 NR1H2P55055 460 aa15.09■□□□□ 0.01
HMGCLL1-202ENST00000308161 P2RY6Q15077 328 aa15.09■□□□□ 0.01
HMGCLL1-202ENST00000308161 ZNF311Q5JNZ3 666 aa15.09■□□□□ 0.01
HMGCLL1-202ENST00000308161 BLOC1S3Q6QNY0 202 aa15.09■□□□□ 0.01
HMGCLL1-202ENST00000308161 Q6ZT83 130 aa15.09■□□□□ 0.01
HMGCLL1-202ENST00000308161 P3H2Q8IVL5 708 aa15.09■□□□□ 0.01
HMGCLL1-202ENST00000308161 PIGTQ969N2 578 aa15.09■□□□□ 0.01
HMGCLL1-202ENST00000308161 OR10A4Q9H209 315 aa15.09■□□□□ 0.01
HMGCLL1-202ENST00000308161 SLC25A37Q9NYZ2 338 aa15.09■□□□□ 0.01
HMGCLL1-202ENST00000308161 SLAMF8Q9P0V8 285 aa15.09■□□□□ 0.01
HMGCLL1-202ENST00000308161 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.09■□□□□ 0.01
HMGCLL1-202ENST00000308161 ROS1P08922 2347 aa15.09■□□□□ 0.01
HMGCLL1-202ENST00000308161 PRR14LQ5THK1 2151 aa15.08■□□□□ 0.01
HMGCLL1-202ENST00000308161 ZNF716A6NP11 495 aa15.08■□□□□ 0
HMGCLL1-202ENST00000308161 ZNF208O43345 1280 aa15.08■□□□□ 0
HMGCLL1-202ENST00000308161 FRS3O43559 492 aa15.08■□□□□ 0
HMGCLL1-202ENST00000308161 IMPDH2P12268 514 aa15.08■□□□□ 0
HMGCLL1-202ENST00000308161 H2AFXP16104 143 aaPredicted RBP15.08■□□□□ 0
HMGCLL1-202ENST00000308161 SLC35A1P78382 337 aa15.08■□□□□ 0
HMGCLL1-202ENST00000308161 BNIP2Q12982 314 aa15.08■□□□□ 0
HMGCLL1-202ENST00000308161 FADDQ13158 208 aa15.08■□□□□ 0
HMGCLL1-202ENST00000308161 SQLEQ14534 574 aa15.08■□□□□ 0
HMGCLL1-202ENST00000308161 PAGE3Q5JUK9 113 aa15.08■□□□□ 0
HMGCLL1-202ENST00000308161 C20orf204Q6ZNR8 217 aa15.08■□□□□ 0
HMGCLL1-202ENST00000308161 SERPINA11Q86U17 422 aa15.08■□□□□ 0
HMGCLL1-202ENST00000308161 CKAP2Q8WWK9 683 aa15.08■□□□□ 0
HMGCLL1-202ENST00000308161 APH1AQ96BI3 265 aa15.08■□□□□ 0
HMGCLL1-202ENST00000308161 PERPQ96FX8 193 aa15.08■□□□□ 0
HMGCLL1-202ENST00000308161 MAGEB18Q96M61 343 aa15.08■□□□□ 0
HMGCLL1-202ENST00000308161 POTEKPQ9BYX7 375 aa15.08■□□□□ 0
HMGCLL1-202ENST00000308161 ARMC7Q9H6L4 198 aa15.08■□□□□ 0
HMGCLL1-202ENST00000308161 VIPAS39Q9H9C1 493 aa15.08■□□□□ 0
HMGCLL1-202ENST00000308161 A4GALTQ9NPC4 353 aa15.08■□□□□ 0
HMGCLL1-202ENST00000308161 DCTN4Q9UJW0 460 aa15.08■□□□□ 0
HMGCLL1-202ENST00000308161 ACANP16112 2415 aa15.08■□□□□ 0
HMGCLL1-202ENST00000308161 C2CD3Q4AC94 2353 aa15.07■□□□□ 0
HMGCLL1-202ENST00000308161 FLNAP21333 2647 aaKnown RBP15.07■□□□□ 0
HMGCLL1-202ENST00000308161 SETD2Q9BYW2 2564 aaPredicted RBP15.07■□□□□ 0
HMGCLL1-202ENST00000308161 IGKV3D-15A0A087WSY6 115 aa15.07■□□□□ 0
HMGCLL1-202ENST00000308161 FAAHO00519 579 aa15.07■□□□□ 0
HMGCLL1-202ENST00000308161 GPR171O14626 319 aa15.07■□□□□ 0
HMGCLL1-202ENST00000308161 DNPH1O43598 174 aa15.07■□□□□ 0
HMGCLL1-202ENST00000308161 THBS1P07996 1170 aa15.07■□□□□ 0
HMGCLL1-202ENST00000308161 IGHV1-2P23083 117 aa15.07■□□□□ 0
HMGCLL1-202ENST00000308161 ADSLP30566 484 aaPredicted RBP15.07■□□□□ 0
HMGCLL1-202ENST00000308161 IDUAP35475 653 aa15.07■□□□□ 0
HMGCLL1-202ENST00000308161 ACAA2P42765 397 aaKnown RBP15.07■□□□□ 0
HMGCLL1-202ENST00000308161 MRPL19P49406 292 aaKnown RBP15.07■□□□□ 0
HMGCLL1-202ENST00000308161 HOXC5Q00444 222 aa15.07■□□□□ 0
HMGCLL1-202ENST00000308161 OR7A5Q15622 319 aa15.07■□□□□ 0
HMGCLL1-202ENST00000308161 Q5PR19 223 aa15.07■□□□□ 0
HMGCLL1-202ENST00000308161 GCNT6Q5T4J0 391 aa15.07■□□□□ 0
HMGCLL1-202ENST00000308161 RNF220Q5VTB9 566 aa15.07■□□□□ 0
HMGCLL1-202ENST00000308161 WBP2NLQ6ICG8 309 aa15.07■□□□□ 0
HMGCLL1-202ENST00000308161 CASP12Q6UXS9 341 aa15.07■□□□□ 0
HMGCLL1-202ENST00000308161 ATG4DQ86TL0 474 aaPredicted RBP15.07■□□□□ 0
HMGCLL1-202ENST00000308161 MSRB3Q8IXL7 192 aa15.07■□□□□ 0
HMGCLL1-202ENST00000308161 NFKBIDQ8NI38 313 aa15.07■□□□□ 0
HMGCLL1-202ENST00000308161 BBS10Q8TAM1 723 aa15.07■□□□□ 0
HMGCLL1-202ENST00000308161 HSD17B8Q92506 261 aa15.07■□□□□ 0
HMGCLL1-202ENST00000308161 NAA11Q9BSU3 229 aaPredicted RBP15.07■□□□□ 0
HMGCLL1-202ENST00000308161 SPATA9Q9BWV2 254 aa15.07■□□□□ 0
HMGCLL1-202ENST00000308161 NPHS2Q9NP85 383 aa15.07■□□□□ 0
HMGCLL1-202ENST00000308161 NGBQ9NPG2 151 aa15.07■□□□□ 0
HMGCLL1-202ENST00000308161 TRAPPC4Q9Y296 219 aa15.07■□□□□ 0
HMGCLL1-202ENST00000308161 IFT52Q9Y366 437 aa15.07■□□□□ 0
HMGCLL1-202ENST00000308161 ARHGEF9O43307 516 aa15.06■□□□□ 0
HMGCLL1-202ENST00000308161 EIF1BO60739 113 aaKnown RBP15.06■□□□□ 0
HMGCLL1-202ENST00000308161 MRPL33O75394 65 aaKnown RBP15.06■□□□□ 0
HMGCLL1-202ENST00000308161 RAD51DO75771 328 aa15.06■□□□□ 0
HMGCLL1-202ENST00000308161 HOXB9P17482 250 aaPredicted RBP15.06■□□□□ 0
HMGCLL1-202ENST00000308161 HOXC12P31275 282 aa15.06■□□□□ 0
HMGCLL1-202ENST00000308161 RIPPLY3P57055 190 aa15.06■□□□□ 0
HMGCLL1-202ENST00000308161 CEACAM7Q14002 265 aa15.06■□□□□ 0
HMGCLL1-202ENST00000308161 PDK3Q15120 406 aa15.06■□□□□ 0
HMGCLL1-202ENST00000308161 OTUD3Q5T2D3 398 aaPredicted RBP15.06■□□□□ 0
HMGCLL1-202ENST00000308161 LRIF1Q5T3J3 769 aa15.06■□□□□ 0
HMGCLL1-202ENST00000308161 C10orf111Q8N326 155 aa15.06■□□□□ 0
HMGCLL1-202ENST00000308161 AKAP1Q92667 903 aaKnown RBP eCLIP15.06■□□□□ 0
HMGCLL1-202ENST00000308161 ADAM19Q9H013 955 aa15.06■□□□□ 0
HMGCLL1-202ENST00000308161 ESRP2Q9H6T0 727 aaKnown RBP15.06■□□□□ 0
HMGCLL1-202ENST00000308161 ADPRHL2Q9NX46 363 aa15.06■□□□□ 0
HMGCLL1-202ENST00000308161 VAPAQ9P0L0 249 aa15.06■□□□□ 0
HMGCLL1-202ENST00000308161 CHST2Q9Y4C5 530 aa15.06■□□□□ 0
HMGCLL1-202ENST00000308161 RNF115Q9Y4L5 304 aa15.06■□□□□ 0
HMGCLL1-202ENST00000308161 CIB4A0PJX0 185 aa15.05■□□□□ -0
HMGCLL1-202ENST00000308161 CCT8L1PA6NM43 557 aa15.05■□□□□ -0
HMGCLL1-202ENST00000308161 DSCAMO60469 2012 aa15.05■□□□□ -0
HMGCLL1-202ENST00000308161 SASH3O75995 380 aa15.05■□□□□ -0
HMGCLL1-202ENST00000308161 AKR7A3O95154 331 aa15.05■□□□□ -0
HMGCLL1-202ENST00000308161 PGM3O95394 542 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms