RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 ERVK-16P61578 105 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 TUBA3CQ13748 450 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 ESCO2Q56NI9 601 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 TXNDC15Q96J42 360 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 ELOVL3Q9HB03 270 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 TUBA8Q9NY65 449 aaPredicted RBP9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 SERGEFQ9UGK8 458 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 SLC17A4Q9Y2C5 497 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 YARS2Q9Y2Z4 477 aaKnown RBP9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 UBE2J1Q9Y385 318 aaPredicted RBP9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 H0YAE9 185 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 TSFMP43897 325 aaKnown RBP9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 RUNDC3AQ59EK9 446 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 OR5M9Q8NGP3 310 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 FUZQ9BT04 418 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 FBXO4Q9UKT5 387 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 PCDHGA7Q9Y5G6 932 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 TRAV36DV7A0A075B6V5 113 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 DCDC2BA2VCK2 349 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 FCGR2AP12318 317 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 PSMB10P40306 273 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 FXYD4P59646 89 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 CCDC36Q8IYA8 594 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 OR5W2Q8NH69 310 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 BOD1Q96IK1 185 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 SORT1Q99523 831 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 B3GALT1Q9Y5Z6 326 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 LRRC30A6NM36 301 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 PLPP1O14494 284 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 ENSAO43768 121 aaKnown RBP9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 MAGEA3P43357 314 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 EPHA5P54756 1037 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 BTG2P78543 158 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 ZNF773Q6PK81 442 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 DTWD1Q8N5C7 304 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 B3GNT7Q8NFL0 401 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 IL17RDQ8NFM7 739 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 OR13C2Q8NGS9 318 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 TSLPQ969D9 159 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 ZNF221Q9UK13 617 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 ZNF814B7Z6K7 855 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 FBP2O00757 339 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 HSPB6O14558 160 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 ABHD16AO95870 558 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 PCBP4P57723 403 aaKnown RBP9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 CXCR4P61073 352 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 PIGGQ5H8A4 983 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 C5orf46Q6UWT4 87 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 ARSKQ6UWY0 536 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 LILRA2Q8N149 483 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 SCGB1C1Q8TD33 95 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 UBTD2Q8WUN7 234 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 ACOT11Q8WXI4 607 aaPredicted RBP9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 ST6GALNAC5Q9BVH7 336 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 PPT2Q9UMR5 302 aa9.92□□□□□ -0.82
SYNPO2-201ENST00000307142 KANTRA0A1W2PQU2 76 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 TNFSF11O14788 317 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 RETP07949 1114 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 TRA2AQ13595 282 aaKnown RBP eCLIP9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 SPHARQ15513 63 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 COL28A1Q2UY09 1125 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 LCN8Q6JVE9 175 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 IL1F10Q8WWZ1 152 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 HSD17B8Q92506 261 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 MS4A6EQ96DS6 147 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 SLC45A3Q96JT2 553 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 EXTL2Q9UBQ6 330 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 PFDN2Q9UHV9 154 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 EMCNQ9ULC0 261 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 A0A087WUU8 490 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 OTOL1A6NHN0 477 aaPredicted RBP9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 H7C417 338 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 GABBR2O75899 941 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 SERPINA5P05154 406 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 HSD17B1P14061 328 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 MAGEA12P43365 314 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 ZNF684Q5T5D7 378 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 SFTPA1Q8IWL2 248 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 MKXQ8IYA7 352 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 MORN4Q8NDC4 146 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 OR5H2Q8NGV7 314 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 ZNF300Q96RE9 604 aaPredicted RBP9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 C1orf198Q9H425 327 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 H7C1C5 153 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 LCN6P62502 163 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 TUBA1BP68363 451 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 TUBA4AP68366 448 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 HES5Q5TA89 166 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 SBSNQ6UWP8 590 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 TUBA1AQ71U36 451 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 HDAC2Q92769 488 aaKnown RBP9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 P2RY12Q9H244 342 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 OR52D1Q9H346 318 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 A0A1B0GVC2 190 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 hCG_1809904A0A1W2PP81 198 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 A0A1W2PPE2 198 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 A0A1W2PR64 198 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 A0A1W2PRV1 198 aa9.91□□□□□ -0.82
SYNPO2-201ENST00000307142 MEN1O00255 615 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms