RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 KDM4DQ6B0I6 523 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 MEX3DQ86XN8 651 aaKnown RBP11.9□□□□□ -0.5
PTCD1-201ENST00000292478 ENTHD1Q8IYW4 607 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 NLGN4XQ8N0W4 816 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 ARL11Q969Q4 196 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 LCORQ96JN0 433 aaPredicted RBP11.9□□□□□ -0.5
PTCD1-201ENST00000292478 HCAR1Q9BXC0 346 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 BOKQ9UMX3 212 aaPredicted RBP11.9□□□□□ -0.5
PTCD1-201ENST00000292478 FAM183AA6NL82 134 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 KLK8O60259 260 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 OR8U9P0C7N5 309 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 P2RY14Q15391 338 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 COMMD7Q86VX2 200 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 GIMAP5Q96F15 307 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 ENKD1Q9H0I2 346 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 POU2F3Q9UKI9 436 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.9□□□□□ -0.5
PTCD1-201ENST00000292478 PTHP01270 115 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 GYPBP06028 91 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 ADARB1P78563 741 aaKnown RBP11.9□□□□□ -0.5
PTCD1-201ENST00000292478 NKPD1Q17RQ9 610 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 MPEG1Q2M385 716 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 SLC35D3Q5M8T2 416 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 SYT6Q5T7P8 510 aaPredicted RBP11.9□□□□□ -0.5
PTCD1-201ENST00000292478 GLB1L2Q8IW92 636 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 CLEC1AQ8NC01 280 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 GAB3Q8WWW8 586 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 NOX3Q9HBY0 568 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 SIDT1Q9NXL6 827 aaKnown RBP11.9□□□□□ -0.5
PTCD1-201ENST00000292478 ZNF226Q9NYT6 803 aa11.9□□□□□ -0.5
PTCD1-201ENST00000292478 DCNP07585 359 aaKnown RBP11.89□□□□□ -0.51
PTCD1-201ENST00000292478 GCH1P30793 250 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 TAS2R20P59543 309 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 RAB5BP61020 215 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 LEXMQ3ZCV2 418 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 ELSPBP1Q96BH3 223 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 ELMOD3Q96FG2 381 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 OR5B12Q96R08 314 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 CCNL2Q96S94 520 aaPredicted RBP11.89□□□□□ -0.51
PTCD1-201ENST00000292478 LINC01553A4QN01 128 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 ZNF705EA8MWA4 302 aaPredicted RBP11.89□□□□□ -0.51
PTCD1-201ENST00000292478 SUSD5O60279 629 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 SNU13P55769 128 aaKnown RBP11.89□□□□□ -0.51
PTCD1-201ENST00000292478 ZNF616Q08AN1 781 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 MFSD12Q6NUT3 480 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 ELP4Q96EB1 424 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 NRIP3Q9NQ35 241 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 TLCD2A6NGC4 264 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 APOC3P02656 99 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 BMP4P12644 408 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 NPR2P20594 1047 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 PTGER1P34995 402 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 SIRPAP78324 504 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 AKR1C8PQ5T2L2 129 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 VASNQ6EMK4 673 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 DLEU7Q6UYE1 221 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 KIAA0907Q7Z7F0 614 aaPredicted RBP11.89□□□□□ -0.51
PTCD1-201ENST00000292478 MRPL41Q8IXM3 137 aaKnown RBP11.89□□□□□ -0.51
PTCD1-201ENST00000292478 AGBL5Q8NDL9 886 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 OR52N1Q8NH53 320 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 DCUN1D4Q92564 292 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 TSPAN10Q9H1Z9 355 aaPredicted RBP11.89□□□□□ -0.51
PTCD1-201ENST00000292478 SEMA4GQ9NTN9 838 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 CORINQ9Y5Q5 1042 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 WIF1Q9Y5W5 379 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 TARM1B6A8C7 271 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 DLSTP36957 453 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 TEKQ02763 1124 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 POU3F1Q03052 451 aaPredicted RBP11.89□□□□□ -0.51
PTCD1-201ENST00000292478 LRRC26Q2I0M4 334 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 CLVS2Q5SYC1 327 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 C12orf45Q8N5I9 185 aaPredicted RBP11.89□□□□□ -0.51
PTCD1-201ENST00000292478 PSD2Q9BQI7 771 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 CENPOQ9BU64 300 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 REV1Q9UBZ9 1251 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 LOC102723532A0A0G2JNH3 316 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 HCRTR1O43613 425 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 SLC43A1O75387 559 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 GABARAPO95166 117 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 GDF1P27539 372 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 RPP30P78346 268 aaKnown RBP11.89□□□□□ -0.51
PTCD1-201ENST00000292478 S100A12P80511 92 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 ARF1P84077 181 aaKnown RBP11.89□□□□□ -0.51
PTCD1-201ENST00000292478 C17orf67Q0P5P2 114 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 FNDC9Q8TBE3 224 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 WFDC5Q8TCV5 224 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 SLC2A12Q8TD20 617 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 MYLIPQ8WY64 445 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 TXNDC15Q96J42 360 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 NDUFAF4Q9P032 175 aa11.89□□□□□ -0.51
PTCD1-201ENST00000292478 SMCO3A2RU48 225 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 KNG1P01042 644 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 CD79AP11912 226 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 TACR3P29371 465 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 TRHRP34981 398 aaPredicted RBP11.88□□□□□ -0.51
PTCD1-201ENST00000292478 BCL6P41182 706 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 SLC6A12P48065 614 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 EEF1A1P68104 462 aaKnown RBP11.88□□□□□ -0.51
PTCD1-201ENST00000292478 ZP2Q05996 745 aa11.88□□□□□ -0.51
PTCD1-201ENST00000292478 EIF2S3LQ2VIR3 472 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms